Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01283 ATGGCGAAAATAGCTGCTTCTTCGGCCTCAGCCTCTACATCCACCACCGGAAAACTAGTGTTGAGGATTAAATCAAATGAGGGAATGAAGAGATCGTTGCGTCAGACTAAGTCAAGAGaggaaaccaaagcaaatcaaaataagagcaaacaaaAGATTGATGCTGAGAAGCCAAAGAAACCCCCCACTGCTTTCTTCTACTTTTTGGAGGATTTTCGGAAAGAATATCAACAGCAGAATCCAGATGTAAAGTCAATGCGTGATATTGGCAAGGCGTGTGGAGAGAAGTGGAAAACAATGACTTATGAGGAGAAGGTTCAATACTACGATATAGCAACAGAAAAACGTGCAGAATTTGATAGAGCAACAACAGAGTATAACAAGAAAAAGGTAACCAATCTGTCATATTCATGGCCAGTGAGCTAA 426 0.3803 MAKIAASSASASTSTTGKLVLRIKSNEGMKRSLRQTKSREETKANQNKSKQKIDAEKPKKPPTAFFYFLEDFRKEYQQQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRATTEYNKKKVTNLSYSWPVS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01283 141 Gene3D High mobility group box domain 52 135 IPR036910 -
Car06g01283 141 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 6 130 - -
Car06g01283 141 MobiDBLite consensus disorder prediction 1 21 - -
Car06g01283 141 CDD HMGB-UBF_HMG-box 58 122 - -
Car06g01283 141 Pfam HMG (high mobility group) box 58 127 IPR009071 -
Car06g01283 141 MobiDBLite consensus disorder prediction 1 59 - -
Car06g01283 141 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 58 127 IPR009071 -
Car06g01283 141 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 6 130 - -
Car06g01283 141 MobiDBLite consensus disorder prediction 24 59 - -
Car06g01283 141 SUPERFAMILY HMG-box 45 126 IPR036910 -
Car06g01283 141 SMART hmgende2 57 128 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01283 Car-Chr6 12685941 12687984 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Car06g01283 HMG_box 1.4e-17 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01283 - - lang:109362761 199.519