Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01276 ATGCAGACTCACGAGTATTTTATCCCGGGAAAGACGGTACATCCTTTGGCAGATGAAGCCGTTGGTACTTATATGAATGCTCCACATGCTTCTACCTTTGATGCAGTTTTCCCTTCTGGTGTGAGACATATGACACCATTTGAAAGGTTTAAATTGCAGCCTTCTGAGGTTTGCCCCAAGAAATTCATTGTCTTTGATCAAACCGATCAACAAAGCAGGATTTTTTTTAATCCTGCGACGACCTACAAGTTTAACAGTCCCGGCTTCAACACCCATGCTGCGTTTACTCAAGATTTTGAAAAGGATAAAATTAATCAAATGGAAAGGGAATTGTCATCTTCCTTTGAAGAGGATTCTAAGGACATTGATGCGTTGTTGAGCCTAGAAACGGATGAACTAGCGAACTATGATGAGGAAGAAGTCAGCACAGCAAGGACCCGTGAAAAAGACGAAAGTACATCTGATACTTGCTCCAGTTATCGCACGAAATCGAGGAAGAAGAGGTTGTTATCATCTTCTGCGCAAAACTCTTCTGGGTCCAGGAGTTACTGCAACAGTGAAAAGAAACAACACCTGGAGATGAAGAGGATGGTGAAGATGTTGAGAAATATTGTGCCTGGTGGAGGAAACCAGATGGATACTGTTACCGTTTTGGACGAAGCTGTAAAGTACCTCAAGACTCTCAAGGTTGAAGTGGAGCAATTCGGAGTCGGACCATGA 720 0.4292 MQTHEYFIPGKTVHPLADEAVGTYMNAPHASTFDAVFPSGVRHMTPFERFKLQPSEVCPKKFIVFDQTDQQSRIFFNPATTYKFNSPGFNTHAAFTQDFEKDKINQMERELSSSFEEDSKDIDALLSLETDELANYDEEEVSTARTREKDESTSDTCSSYRTKSRKKRLLSSSAQNSSGSRSYCNSEKKQHLEMKRMVKMLRNIVPGGGNQMDTVTVLDEAVKYLKTLKVEVEQFGVGP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01276 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 228 IPR011598 GO:0046983
Car06g01276 239 PANTHER TRANSCRIPTION FACTOR BHLH145 1 238 IPR037546 -
Car06g01276 239 MobiDBLite consensus disorder prediction 136 189 - -
Car06g01276 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 234 IPR036638 GO:0046983
Car06g01276 239 PANTHER TRANSCRIPTION FACTOR BHLH144 1 238 - -
Car06g01276 239 Gene3D - 176 236 IPR036638 GO:0046983
Car06g01276 239 MobiDBLite consensus disorder prediction 169 185 - -
Car06g01276 239 MobiDBLite consensus disorder prediction 138 162 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01276 16 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 40.496 6.20e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01276 - - mtr:MTR_4g096660 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01276 06 12637450 12640730 Car06g01276 06 12637450 12640730 ECH