Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01266 ATGGCCGATGAACCAATGCCTACTCGCTGGTCCTTCCAGGAGTTCAAAGCGTATTATGATGCTAGGCTTGGTAGGAAGAAACTGGTGGAGAATGGTGAGACTGTTGAGACTGTTGATAAGGCCGTTGGTAATGGCAGTTCGAACGGCATTGCATCCAATGGCAATTTACAGACCAAAATAACATCAGATAGGGCTATTTACGAGCAGTTCCAAAGCCAGGGGCATAATCCGACGCCTACAAATGGTTTTGCACCAAACAATATAGATGAAAAGCCGCAGAAGTCTTTGCTACCACCTTTTGAATCTGCAGAAATGCGTACTTTAGCGGAGAGCTTAAGTAGGGATATCATTCGTGGGAGTCCAGATGTGAAATGGGAAAGCATCAAGGGGTTAGAGAATGCCAAACGTTTACTGAAAGAAGCTGTTGTGATGCCGATTAAGTATCCCAAGTACTTTAAAGGTCTGTTATCACCATGGAAGGGCATTCTCCTTTTTGGCCCCCCAGGGACAGGAAAGACAATGCTCGCAAAAGCAGTTGCTACAGAGTGCAAGACTACATTTTTCAATATTTCAGCATCGTCTATTGTCAGCAAATGGCGAGGTGATTCAGAGAAGTTAGTGAAAGTGTTATTTGAGCTTGCAAGGCACCATGCGCCTGCAACAATATTTCTTGACGAAATTGATGCAATCATTAGTCAACGTGGTGAGGCACGCAGTGAACATGAAGCAAGTAGACGGTTAAAAACTGAACTACTCATTCAGATGGATGGTTTAACACGGACAGATGAACTTGTTTTTGTTTTGGCGGCAACAAATCTTCCCTGGGAGTTGGATGCGGCCATGCTGAGACGTCTTGAGAAGCGAATCCTTGTACCACTTCCAGAGCCAGAAGCAAGAAGATCAATGTTTGAGGAACTCCTTCCTCCACAGCTTGACGAGGAGCCGATCCCCTATGATTTACTGGTGGATCGGTCAGAAGGATATTCAGGTTCAGATATCCGCCTACTTTGTAAAGAGACAGCAATGCAGCCACTGAGACGCTTAATGTCACAACTTGAACAGGAACAAGATGTGGTGCCTGAAGAAGAGTTGCCACAAGTTGGGCCAGTCAGGCCTGAAGATGTAGAGACAGCTTTAAGGAACACGCGGCCATCTGCTCATCTCCATGCTTACAAATATGACAAGTTTAATGCTGATTATGGTAGTCAAATACTTCAATGA 1221 0.4496 MADEPMPTRWSFQEFKAYYDARLGRKKLVENGETVETVDKAVGNGSSNGIASNGNLQTKITSDRAIYEQFQSQGHNPTPTNGFAPNNIDEKPQKSLLPPFESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFKGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRSMFEELLPPQLDEEPIPYDLLVDRSEGYSGSDIRLLCKETAMQPLRRLMSQLEQEQDVVPEEELPQVGPVRPEDVETALRNTRPSAHLHAYKYDKFNADYGSQILQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01266 406 CDD AAA 129 293 - -
Car06g01266 406 Pfam AAA+ lid domain 320 355 IPR041569 -
Car06g01266 406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 389 IPR027417 -
Car06g01266 406 PANTHER AAA DOMAIN-CONTAINING 9 404 - -
Car06g01266 406 Gene3D - 294 382 - -
Car06g01266 406 SMART AAA_5 158 295 IPR003593 -
Car06g01266 406 Gene3D - 121 395 IPR027417 -
Car06g01266 406 Pfam ATPase family associated with various cellular activities (AAA) 162 292 IPR003959 GO:0005524|GO:0016887
Car06g01266 406 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 9 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01266 Car-Chr6 12547344 12554462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01266 156 365 Calmodulin-binding Proteins AT3G56690 36.620 9.36e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01266 K07767 - gmx:100794098 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01266 06 12547344 12554462 Car06g01266 06 12547344 12554462 ECH