Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01261 ATGGTTCAACAAGGGATCATCTCAGGGTTCGGTTTGGGAATGCTTATCTTGATTGTCTTCTGCACTTATGGACTTGCCATGTGGTCATTGGGTCATACATCTCCAAGTGCAAATGCATTTGCTGCAGTTCAAGCAGCAGCATATAAAATGTTTGAGACAATTAAAAGAAAGCCTAAAATTGATGCATATGACACAAGTGGTGTTGTCTTGGAAGACATAAAGGGAGATATTGGATTTAAAGATGTTCACTTTAGATACCCTGCAAGGCCAGATGTGCAGATCTTTGCTGGATTTTCATTATTCTATGATCCTGATGCTGGAGAAGTACTTATAGATGGTGTGAATTTGAACAATTTTCAACTTAGATGGATAAGAGAACAGATTGAACTTGTTGGTCAAGAACCCGTCTTGTTTACAACTACTATCAGAAAGAACATAGCATATGGGAAAGAAGGTGCAACTGATGAGGAGATAACAGCAGCAATAACACTTGCCAATGCAAAAAAGTTCATCGATAGGTTACCTCAGGGTCTTGACCCAATGGCAGGGAAGAATGGGACTCAACTTTCTGGTGAACGAAAGCAAAGAATTGCAATTGCAAGAGCAATATTGAAGAATCCAAGAATCCTTCTTCTTGATGAAGCAACACGTGCATTGGATGCTGAGTCTGAACTGCTTCATCAGGGAAAAATTGTGGAGAGAGGAACTCATAACGAGTTAACCATGGATGCTGAATGTGCTTATTCTCAACTTATTCATCTTCAAGAAGGAGAAAAAGAAGCTGAAGgttcaagaggcttagtaaagaaatctgccagcatatttgatgaagatatgggcaagagtttgaacaatccagcttgcagtttgtcccgaacaatgtga 885 0.3525 MVQQGIISGFGLGMLILIVFCTYGLAMWSLGHTSPSANAFAAVQAAAYKMFETIKRKPKIDAYDTSGVVLEDIKGDIGFKDVHFRYPARPDVQIFAGFSLFYDPDAGEVLIDGVNLNNFQLRWIREQIELVGQEPVLFTTTIRKNIAYGKEGATDEEITAAITLANAKKFIDRLPQGLDPMAGKNGTQLSGERKQRIAIARAILKNPRILLLDEATRALDAESELLHQGKIVERGTHNELTMDAECAYSQLIHLQEGEKEAEGSRGLVKKSASIFDEDMGKSLNNPACSLSRTM 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01261 294 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 225 273 - -
Car06g01261 294 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 2 224 - -
Car06g01261 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 255 IPR027417 -
Car06g01261 294 Pfam ABC transporter 99 216 IPR003439 GO:0005524
Car06g01261 294 Gene3D - 101 225 IPR027417 -
Car06g01261 294 Gene3D - 67 99 IPR027417 -
Car06g01261 294 Gene3D ABC transporter type 1, transmembrane domain 16 66 IPR036640 GO:0005524|GO:0016021
Car06g01261 294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 281 IPR003439 GO:0005524
Car06g01261 294 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 225 273 IPR039421 -
Car06g01261 294 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 2 224 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01261 Car-Chr6 12502558 12504862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01261 3 260 Calmodulin-binding Proteins AT2G36910 38.329 1.48e-62 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01261 K05658 - gmx:100801771 376.711