Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01229 ATGAGCTCAAGGAATGGTTCTCTTTTTGGTGGAGGGGATGAGATGGAAGGAGATGGTAGCCAGCTTGATATGGGAGTGCTGGAATTCAATAGGGTCACTGCTTCTGTTGGCAAAGGAAGGGGAGGAAAAGCTACCGAACATTTTGCAACTGAGAAACAAAGAAGAGAGCAATTGAATGGAAAATACAAAATTTTGAGGAGTCTCATCCCAAATCCCACCAAGATTGATAGAGCATCAGTGTTGGGAGATGCTATTGAGTATATAAGAGAACTAGTTAGAACAAAGAATGAGCTGACATTATTGGTTGAGAGGAAAAGACATGGGAGGGAAATGAGCAAGAGACTTAAAACTGAAGATGATGCTGCAGAAAGCTGTAATATAAAGCCTTTTGGTGATGCAGATGGAAGCATAAGGACCTCATGGCTGCAGAGGAAATCCAAAGACAGTGCGGTTTTGGATGAACTTCAGTTGGAACTTTACCATGTTGCAGGTGGATTTGTTGGTGAATATTTTAGCTTCTTGCTCAAAAGCAAGGTAATTGAAGGTTCATCAGTGTATCCAAGTGCCATAGCCAACAGGGTGATTGATGTTTTGGACACTCAATATGCAGCAGTTGTTCCAATTTTAAGTAGGCTATAG 639 0.4147 MSSRNGSLFGGGDEMEGDGSQLDMGVLEFNRVTASVGKGRGGKATEHFATEKQRREQLNGKYKILRSLIPNPTKIDRASVLGDAIEYIRELVRTKNELTLLVERKRHGREMSKRLKTEDDAAESCNIKPFGDADGSIRTSWLQRKSKDSAVLDELQLELYHVAGGFVGEYFSFLLKSKVIEGSSVYPSAIANRVIDVLDTQYAAVVPILSRL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01229 212 PANTHER TRANSCRIPTION FACTOR BHLH91 10 151 - -
Car06g01229 212 CDD bHLH_AtMYC1_like 47 113 IPR045896 -
Car06g01229 212 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 42 91 IPR011598 GO:0046983
Car06g01229 212 PANTHER TRANSCRIPTION FACTOR BHLH91 10 151 IPR045895 GO:0006355|GO:0048658
Car06g01229 212 MobiDBLite consensus disorder prediction 1 21 - -
Car06g01229 212 PANTHER TRANSCRIPTION FACTOR BHLH91 149 206 - -
Car06g01229 212 Gene3D - 40 100 IPR036638 GO:0046983
Car06g01229 212 PANTHER TRANSCRIPTION FACTOR BHLH91 149 206 IPR045895 GO:0006355|GO:0048658
Car06g01229 212 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 106 IPR036638 GO:0046983
Car06g01229 212 Pfam Helix-loop-helix DNA-binding domain 45 91 IPR011598 GO:0046983
Car06g01229 212 SMART finulus 48 97 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01229 Car-Chr6 12174683 12175806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01229 16 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 38.956 2.33e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car06g01229 HLH 3.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01229 - - cam:101503420 400.593