Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01227 ATGGAAAAAATGGTATTTTCAAATATACCTTCAGGTGCGACCATCAATTTTCAACAACCACAAGCTACTCCAAAGCGAAAGAAGAGAACAAGGACCCACTCGCGTCACACTCATCATCATCAAATAGCTAAACTGGATCAGCATACCAAAACCGAAGATATTGAGCGTGTTCAAATAGGCCAGGAAACAGGGCTTGCTGCAAGTCAAATCAAGCATTGGCTCCACAATAAGAGGACCCTATTAAAGGGGTCTACACCGCAAGAATCAAAAGTACTTACTATGCAAAACTTGCTTCACGAAAATCAAAGGTTACGCAAAGAGCATAGGAAACTATCGAACTTCAATGGCAAAAAGCAAAGGAAAAATCCAGTGGAGCCTCTAATATTTAAAGATTTTCAATACATACTTCAATCTTCACTTGGAGGTTTTGGACACAAAAACAATGAAACAAATGTTCCTGATCAACATATTGCTGCTGTTACTCCACATATTCCTGCTATAATTGATCACAATATTCCTGTTATTGATAAGCATATTGATTTTATCATTCCTTCTAATGTTTCAATGTTTGATCAATATGTTGCTGATTCTGCACCTATTCATGTTCCTGCTCTTAGTGGTCCTGCAGATTCTGGCCCATATCAAAATATTTCAGCAATTATTCTCAATCAGAATGAACCTGCCCTTTCGTATTCTGTCTATGATCAAAATTGTTCTGCTGTTACTGATGCACTTGATCAAAGTGTGACAGATATTACATCTGCAATTACTCCTGTTGCAGCTGAGAATGATCATCTAAGTTTTTCTGTTACAACAGTTGCAACTGAAAAAAATCTTGTTACTTCTGCTGCCGCTGAGCAAAAAAATTGTGCCATTATTACTTCAGAACCTAGTGAGAATGTTCCAGCTGATTTCATTTATGGTGTTCCACATTTCATAGATGATGGAAAATTGTGTGATGTTACTCCTCCTGCACATGATGAAAATGTTGTAGCTTATGGTGATACACCTTTTCTTGATGAAATTTTTTGTGCTACTAATGGTGCAGCAGTTAAAGATATTGATGATATTTCAGCTCTGTTGACAGCTATTGATCAAGATATTCCTGCTTTTGAGATAAATATGTTTAATCTTTCTAATGTCCTTCATGATACTCCTGTTCCTACCAATCATGAGAACATTATTGTGATTGATGAAGAAACACCCGTTCCTGCTCAGGATCCCCACATGTCTACCATTGATGAGGATTTTATTGTTCCTAAACAAGAGACTGGTGAAGCTCCCCACCCAATAACCATAGGTTGGGAAATGGAAAAACAGCTGATCATGGAGACTGCTAATAATGCTATGGAAGAATTAATAAGGCTTCTTAAATTGAATGAGCCTTTCTGGTTTAGGTCTACAGAAGATGAGAGATTCGTTTTTCAACGTGAGACCTATGACAAGATTTACCATAAGAGCAGTTATTTAAAGGGGCCTCGTAAGCGTACAGAGGCAACCAAAGATTCAGTTATAGTAAGCATGGGTGCTGCACAGTTGGTTGACATGTTTCTAAATTCGGAAAAATGGATGAATCTTTTTCCAACAATTGTTAAAGATGCAGTAACAGTGGAAGTATATGAAGAAGGTTCGATGGAAAACAGAAATGGAGCTTTGCAGTTGATGAATGCAAAAATGCATATTCTATCCCCATTGGTGCCAACACGAGTTGCCTCATTCCTTCGATATTGTAAGCAAATAGAAGAAGGCGTATGGGTGATAGCAGATGTGTCAGTGTCAGTCGGTTCCATACTAGATGCCACCTGTCCTCCTAATGTTTGGAAGTTTCCATCTGGATGCATGATTCAGGAACTTACCAATCACTCCTGCAGGGTATCTTGGGTGGAACACATAGAAGTGGATGATAAGAGTAAAACTGACTTGCTATTCAGAAAAACTATTTGTAGCAATAATGGATATAGAGCTGAAAGATGGCTTTTGACATTGGAAAGAATGTGCCAGAGATTTTCAACTCATTCAATTCAAACTATTCCTTCTCTAGGACTAGGAGAGATTAATACAAATGAAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGA 2160 0.3644 MEKMVFSNIPSGATINFQQPQATPKRKKRTRTHSRHTHHHQIAKLDQHTKTEDIERVQIGQETGLAASQIKHWLHNKRTLLKGSTPQESKVLTMQNLLHENQRLRKEHRKLSNFNGKKQRKNPVEPLIFKDFQYILQSSLGGFGHKNNETNVPDQHIAAVTPHIPAIIDHNIPVIDKHIDFIIPSNVSMFDQYVADSAPIHVPALSGPADSGPYQNISAIILNQNEPALSYSVYDQNCSAVTDALDQSVTDITSAITPVAAENDHLSFSVTTVATEKNLVTSAAAEQKNCAIITSEPSENVPADFIYGVPHFIDDGKLCDVTPPAHDENVVAYGDTPFLDEIFCATNGAAVKDIDDISALLTAIDQDIPAFEINMFNLSNVLHDTPVPTNHENIIVIDEETPVPAQDPHMSTIDEDFIVPKQETGEAPHPITIGWEMEKQLIMETANNAMEELIRLLKLNEPFWFRSTEDERFVFQRETYDKIYHKSSYLKGPRKRTEATKDSVIVSMGAAQLVDMFLNSEKWMNLFPTIVKDAVTVEVYEEGSMENRNGALQLMNAKMHILSPLVPTRVASFLRYCKQIEEGVWVIADVSVSVGSILDATCPPNVWKFPSGCMIQELTNHSCRVSWVEHIEVDDKSKTDLLFRKTICSNNGYRAERWLLTLERMCQRFSTHSIQTIPSLGLGEINTNEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01227 719 Pfam START domain 446 668 IPR002913 GO:0008289
Car06g01227 719 Gene3D - 443 646 IPR023393 -
Car06g01227 719 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 27 690 - -
Car06g01227 719 MobiDBLite consensus disorder prediction 9 23 - -
Car06g01227 719 SUPERFAMILY Bet v1-like 436 669 - -
Car06g01227 719 MobiDBLite consensus disorder prediction 1 37 - -
Car06g01227 719 SMART START_1 444 668 IPR002913 GO:0008289
Car06g01227 719 Coils Coil 94 114 - -
Car06g01227 719 ProSiteProfiles START domain profile. 435 671 IPR002913 GO:0008289
Car06g01227 719 SUPERFAMILY Homeodomain-like 19 80 IPR009057 -
Car06g01227 719 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 27 690 IPR042160 -
Car06g01227 719 CDD START_ArGLABRA2_like 439 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01227 Car-Chr6 12163314 12167795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01227 428 687 Homeobox Transcription Factor Family AT3G03260 40.076 4.58e-56 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01227 K09338 - gmx:100783586 294.664