Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01207 ATGTCACTGAATACTCCAAATTCCGTTTTGAAGGTTGAACAAATCCAAGGTAGAGGAAGAGCAATCATAGCATCTCAACCTCTCAAAGCTGGCCAAATCATCCTCGTCGAttctccaatcctcctctaccctgcttctcctttctcttctcccttctGTCACCACTGCTTCAAATCCTCATCTTCACTTCTTTCTTGCCCTAATTGTAACTACCACCGATTTTGCAATTCAACTTGTCTCTCAAACGCTCTCAACTCCTCTCATTCAAATTGGATTTGCAATGCACTATCGCAACTCCAACGTAATTCTCTTCTCCTTCAACAACCTCTCGAACGACAACTCCAAGCTCGTTTTCTTGTCGCAGCTTACAATCTTGCTATTAACACCCCCTCTAATTTTCAAATTTTGTTATCTCTTCAAGGCTCTGAAAACAACGATGATGCAACTATTGCTTCGGCTCACTTCCTACACCCCCTTATTTCATCTTTCTTTTCGCACCCCCATACTGAATTGTTCACTTTACAATTAACTTCTTCGCTTCTTGCAAAGGATAAACTCAATGCTTTTGGTTTAATGCATCCTTTCTCTGAAAATGATGAACTTAGGTCTGTTAGAGCTTATGGTATTTACCCTAATGCTTCATTTTTTAACCACGATTGTCTTCCTAATGCTTGTAGATTTGATTATGTTGATGTTAACCCGAACGATGATCGGGCATTTGGATGTAATAATACTGACATTATTATTAGGATGATTCATGATGTTCCTCAAGGTAGGGAGATTTGTTTGAGTTATTTTCCTGTCAATGAAAACTATTCTAGTAGGCAGAAGAGATTGTTGGAAGACTATGGTTTCACATGTAATTGTGATAGATGTAATGTGGAATCGAATTGGTCGGATAATGAGAGTGTGGAAGAAAATGGCGAGGAGGATGAACAAGAGGTTATGGTTATGGATGATGAGGAGGAGGAAGAGCAATGTGAAAATATGGAACCATCAGAAACTGATAATAATGATTTTCCACATGCTTATTTTTTTTTGAAATACATGTGTGATAGAACTAATTGTTGGGGAACTTTAGCTCCTTTACCACCAAAGGgtaatgcagtatctaatgtcatggaatgtaatgtttgtggtaaattgaaaagtgatgatgatgatttcaatgttgataatgataaAGGGCTAGAAGGTGAAGTTCCCATGGAAGATTGA 1218 0.344 MSLNTPNSVLKVEQIQGRGRAIIASQPLKAGQIILVDSPILLYPASPFSSPFCHHCFKSSSSLLSCPNCNYHRFCNSTCLSNALNSSHSNWICNALSQLQRNSLLLQQPLERQLQARFLVAAYNLAINTPSNFQILLSLQGSENNDDATIASAHFLHPLISSFFSHPHTELFTLQLTSSLLAKDKLNAFGLMHPFSENDELRSVRAYGIYPNASFFNHDCLPNACRFDYVDVNPNDDRAFGCNNTDIIIRMIHDVPQGREICLSYFPVNENYSSRQKRLLEDYGFTCNCDRCNVESNWSDNESVEENGEEDEQEVMVMDDEEEEEQCENMEPSETDNNDFPHAYFFLKYMCDRTNCWGTLAPLPPKGNAVSNVMECNVCGKLKSDDDDFNVDNDKGLEGEVPMED 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01207 405 SUPERFAMILY SET domain 7 288 IPR046341 -
Car06g01207 405 Gene3D - 52 102 - -
Car06g01207 405 Pfam SET domain 19 265 IPR001214 GO:0005515
Car06g01207 405 CDD SET_SMYD 197 292 - -
Car06g01207 405 Gene3D - 107 188 - -
Car06g01207 405 ProSiteProfiles SET domain profile. 5 266 IPR001214 GO:0005515
Car06g01207 405 SMART set_7 8 272 IPR001214 GO:0005515
Car06g01207 405 Gene3D SET domain 21 292 IPR046341 -
Car06g01207 405 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 2 392 IPR044238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01207 Car-Chr6 11886432 11889022 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car06g01207 SET 4.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01207 - - gmx:100783406 519.62