Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01191 ATGGCGAATCTCAAAACAAACTCTCTAACTATTTTGGTTCTGTTATCACTCCAACATTTCTTCCCTCTACACGTTACTTGTACTATCACTGGTTCCAATAATCCTTCACCATCCAAAACATCAAACAGAAAAACCATTCTAGTTTCTGTCGCAGCCACAGCATCACTCGTTCTACTATCCATCATCGGATTCTTAATCTTCCGTTGTCTAAGAAAGCCTAATGCGAGAAACAAAAACCTAGAACCCGAAAACGAAAACACGTGTCGTCACTTTTCCATCGAAGAGATAAGAGCCGCCACAAAAAACTTCGACGACGGTTTAATCGTCGGTAAAGGAGGTTTCGGAAACGTTTACAAAGGACACATTGACAGGTGTCAAGCGCCCGTTGCCGTTAAGCGGCTCAGACCGGGTTCAGAACAAGGTGCACAGGAGTTCCAAACCGAAATCGAACTGCTCTCACAGTTTCGTCACCCTCACTTGGTTTCTCTCATTGGTTACTGTAACGAAGGTGGAGAAATGATTCTCGTCTACGATTTCATGGCGCGTGGTACCCTACGCGATCATCTTTACGGTAATAGTAACGCGCTTTCGTGGAATCGACGGCTTGAAATTTGTCTCGCTGCGGCGCGTGGGATTCACTTTCTTCATGATGGGGTTAATAATGTCATTCACCGTGATGTGAAGACTACGAACATTCTTTTGGATGAGAATTGGGTTGCGAAGGTTTCGGATTTCGGGTTATCGAAGATTGGGCCGAATGGGTCGACCCATGTTACAACTGATGTGAAGGTTTTGTTGGAGGTATTGTGTGGAAGAGCACCTATCAAGAGCACGGTGGACAAGCAGCAGGAGTTATTGGTTAAGTGGTTCAAGAAGAGTTTTGACGAAGGAAAAGTTGATCAGACGGTGGATCCTAGTTTGAAGGGAAGCATTAAGAATAAGTGTTTGAAGAAATTTGTTGAAGTTGCGTTGAGTTGTTTGCATGATCACGGGAAACAACGGCCTCTGATGAGAGAGGTTGTCACGGGATTGGAGTGTGCAAGGAATCTACAACAAGGTGGGGTCCATGTGGAGGGAAAGGGTAAAGTTGGAAAGAAGGAAATGAGGTTTACCAAAAAAATGGAGGGTGAGAATTTAGGGAGAGGGAAGGAGGAGTCTAGTAGTAGCAGTGGTAGCAAAGGCACGAcaacatcaatatcaacatcaacatcaacatcaaGATGCAGTCAGGAGGAGCAAGCTTTGGTTGTGTACCACCAGAGCTTGGAGTTGGATATCCCATAG 1284 0.4408 MANLKTNSLTILVLLSLQHFFPLHVTCTITGSNNPSPSKTSNRKTILVSVAATASLVLLSIIGFLIFRCLRKPNARNKNLEPENENTCRHFSIEEIRAATKNFDDGLIVGKGGFGNVYKGHIDRCQAPVAVKRLRPGSEQGAQEFQTEIELLSQFRHPHLVSLIGYCNEGGEMILVYDFMARGTLRDHLYGNSNALSWNRRLEICLAAARGIHFLHDGVNNVIHRDVKTTNILLDENWVAKVSDFGLSKIGPNGSTHVTTDVKVLLEVLCGRAPIKSTVDKQQELLVKWFKKSFDEGKVDQTVDPSLKGSIKNKCLKKFVEVALSCLHDHGKQRPLMREVVTGLECARNLQQGGVHVEGKGKVGKKEMRFTKKMEGENLGRGKEESSSSSGSKGTTTSISTSTSTSRCSQEEQALVVYHQSLELDIP 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01191 427 PANTHER OS07G0166700 PROTEIN 36 263 IPR045272 GO:0004714|GO:0006468
Car06g01191 427 PANTHER OS07G0166700 PROTEIN 264 385 IPR045272 GO:0004714|GO:0006468
Car06g01191 427 Gene3D Transferase(Phosphotransferase) domain 1 180 263 - -
Car06g01191 427 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 264 385 - -
Car06g01191 427 MobiDBLite consensus disorder prediction 358 411 - -
Car06g01191 427 MobiDBLite consensus disorder prediction 383 411 - -
Car06g01191 427 Gene3D Phosphorylase Kinase; domain 1 87 179 - -
Car06g01191 427 SMART serkin_6 103 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01191 427 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Car06g01191 427 ProSiteProfiles Protein kinase domain profile. 103 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01191 427 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 36 263 - -
Car06g01191 427 SUPERFAMILY Protein kinase-like (PK-like) 79 345 IPR011009 -
Car06g01191 427 Pfam Protein tyrosine and serine/threonine kinase 109 253 IPR001245 GO:0004672|GO:0006468
Car06g01191 427 Gene3D Transferase(Phosphotransferase) domain 1 264 357 - -
Car06g01191 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Car06g01191 427 MobiDBLite consensus disorder prediction 359 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01191 Car-Chr6 11715681 11717045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01191 86 392 Receptor kinase-like Gene Family AT3G51550 50.148 6.13e-102 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car06g01191 PK_Tyr_Ser-Thr 3.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01191 - - cam:101489535 793.497