Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01159 ATGAGGAAGAAATTGAACTTGGAACTTTGTCTTTTCCCTTCCTCCAATTCCGATCTTCGATGTCCAACAAAGGAAGCTAATGAGAGTGAGGTTAAAGATGAGCAGCAGCACCGACCGTTGACAATTGTTTATGATGGGAAGGTTTGTGTTTGTGATGCTACAGAAATTCAGGCAAAATCGATTTTAATGCTTGCAAATAAAGAGATGGAGGAAAGAGTAAGGACACCAAGATCAGAGCCATCTTCACCAAcattattggtatcatcacattcacattatcataatcacttatATACACCAGCTGGCACTTCTCTTTCCATGAAAAAATCTCTACAGAGGTTTCTCCAAAAGAGGAAGAATCGAATCCAAGAAGCATCACCTTATCATCTTAAACTAAATGACCAAAATTAA 411 0.3528 MRKKLNLELCLFPSSNSDLRCPTKEANESEVKDEQQHRPLTIVYDGKVCVCDATEIQAKSILMLANKEMEERVRTPRSEPSSPTLLVSSHSHYHNHLYTPAGTSLSMKKSLQRFLQKRKNRIQEASPYHLKLNDQN 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01159 136 Pfam Jas motif 108 128 IPR018467 -
Car06g01159 136 PANTHER - 1 128 - -
Car06g01159 136 ProSiteProfiles Tify domain profile. 33 67 IPR010399 -
Car06g01159 136 Pfam tify domain 35 66 IPR010399 -
Car06g01159 136 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 128 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01159 Car-Chr6 11333545 11336380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01159 1 129 Tify Gene Family AT1G30135 38.806 7.93e-22 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Car06g01159 tify 3.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01159 - - gmx:100305565 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01159 06 11333545 11336380 Car06g01159 06 11333545 11336380 ECH