Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01153 ATGGAGGAGGATGAGATTCAAGTTCAATCACAAAACCAGTCATGTAAATTTCCAAGAGTTGGAAACAACAGAAATGATCAAGAAGAAGATTTAGAAGATGGATCAATGAGAAGAGTAGGAGGATGTGATGGAAACACAAACAGATTAAATAATTGGCATCATTCATCAAGAATCATAAGGGTTTCAAGAGCTTCTGGTGGAAAAGATAGACACAGCAAAGTAATGACTTCAAAAGGTTTAAGAGACAGAAGGGTTAGACTTTCTGTAACAACAGCTATTCAATTCTATGATCTTCAAGATAGGTTGGGTTATGACCAACCAAGTAAAGCTGTTGAATGGTTGATTAAATCAGCTTCTGATGCTATTTCTGAATTACCTTCACTCAATAACACATTCCCTAATGATGATGATACTAATCAACTACTACAACCAAGTAGTGAACAACAACAAGGTCTTGATTCAGCTGATGCAGAAATGATTGAGAATGGTGAAAACAACAACTATCATCAGAATCAAAACAACCAGAACAATCTTTGTTTGTCTAAATCTGGTTGTAGTAGTACTTCTGAAACAAGTAAAGGTTCTGGTTTGTCTTTGTCAAGGTGTGATATTCGTGTGAGTCGTGTTAAGGCTagagcaagagcaagagaaagaacagctaaagaaaaggaaaaagagaaCAATGAGTGTTCTcatcatcatcaacaacaacaacaacatcaaATTTCTCAAACAGCTTCATTCACTGAACTACTTACTGGTGGAATCAACAATGCAGTTGCAAATAGTCCAAGAGGGTCATCAATTGATGAAGCTGATCTTTTCAACAAAGCAAGACAACAACAATGGAATTCAGCAGCACCAATGGATCATTACTTTAATTCAGTACTTCTTGGACCTTCTTCTTCTTCATCATCAAGAACACATCATCAATCTTTGTCACAAATCCAATTAGGACATTCACTTCATGaacaacatcatcaatcaatgtcattcagcaataatagtggtgaaaatcagaatcatcagatgcagcagcagcagcagcagcatcaattttcattcataccagataataatgattacaatctgaactttaaaatatcttcttctttgggccttgctggttacaatagggggacccttcagtccaatTCTCTGTCTCATCTTCAGAGGTTTTCAGTTTCACCTATAGATCATGGATCCAATGTAGTAGTACCTTTTTTCATGggtggaggaggaggaggaggTGCTTCTTCTGCTACTACTGCTTCACCTTCACCTTCAGATGCTACTCCTACAATGGAGAataatcatcagattcatcatcatcatcatcagttttcatcTGTTTTTGATGGTAGCCGTTTGCAGCTATATTCAGATCACAAAGGGAAACCCAAAAACTGA 1410 0.2851 MEEDEIQVQSQNQSCKFPRVGNNRNDQEEDLEDGSMRRVGGCDGNTNRLNNWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPSLNNTFPNDDDTNQLLQPSSEQQQGLDSADAEMIENGENNNYHQNQNNQNNLCLSKSGCSSTSETSKGSGLSLSRCDIRVSRVKARARARERTAKEKEKENNECSHHHQQQQQHQISQTASFTELLTGGINNAVANSPRGSSIDEADLFNKARQQQWNSAAPMDHYFNSVLLGPSSSSSSRTHHQSLSQIQLGHSLHEQHHQSMSFSNNSGENQNHQMQQQQQQHQFSFIPDNNDYNLNFKISSSLGLAGYNRGTLQSNSLSHLQRFSVSPIDHGSNVVVPFFMGGGGGGGASSATTASPSPSDATPTMENNHQIHHHHHQFSSVFDGSRLQLYSDHKGKPKN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01153 469 MobiDBLite consensus disorder prediction 213 244 - -
Car06g01153 469 MobiDBLite consensus disorder prediction 22 37 - -
Car06g01153 469 MobiDBLite consensus disorder prediction 1 38 - -
Car06g01153 469 MobiDBLite consensus disorder prediction 321 351 - -
Car06g01153 469 PANTHER TRANSCRIPTION FACTOR TCP24 1 465 - -
Car06g01153 469 ProSiteProfiles TCP domain profile. 67 125 IPR017887 -
Car06g01153 469 MobiDBLite consensus disorder prediction 213 233 - -
Car06g01153 469 MobiDBLite consensus disorder prediction 415 437 - -
Car06g01153 469 ProSiteProfiles R domain profile. 205 223 IPR017888 -
Car06g01153 469 MobiDBLite consensus disorder prediction 129 154 - -
Car06g01153 469 MobiDBLite consensus disorder prediction 7 21 - -
Car06g01153 469 Pfam TCP family transcription factor 66 225 IPR017887 -
Car06g01153 469 MobiDBLite consensus disorder prediction 418 436 - -
Car06g01153 469 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 465 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01153 Car-Chr6 11272999 11276259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01153 47 469 TCP Transcription Factor Family AT4G18390 41.087 2.01e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car06g01153 TCP 8.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01153 - - gmx:100806032 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01153 06 11272999 11276259 Car06g01153 06 11272999 11276259 ECH