Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01143 ATGGCGAAGCAGATTCACGAGATCAAGGATTTTCTGTTGACGGCGCGTAGGAAGGACGCTCGGTCGGTGAAAATCAAGAAGAACAAAGATGTGGTTAAGTTCAAGGTTCGTTGCTCAAAGTATTTGTACACACTCTGTGTTTTCGACACCGACAAAGCTGATAAGTTGAAGCAATCTCTTCCTCCTGGTTTGACTGTTCAAGATCTGTAG 210 0.4429 MAKQIHEIKDFLLTARRKDARSVKIKKNKDVVKFKVRCSKYLYTLCVFDTDKADKLKQSLPPGLTVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01143 69 Pfam Ribosomal L38e protein family 3 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Car06g01143 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Car06g01143 69 PANTHER - 1 69 - -
Car06g01143 69 Gene3D - 1 69 IPR038464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01143 Car-Chr6 11146735 11147516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01143 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 88.406 1.98e-41 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01143 K02923 - fve:101295764 126.331