Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01137 ATGTCGTGGCAAGTGTACGTTGATGATCACCTTCTATGTGACATCGACATCGAAGGTAACCACCTCCCTTCTACTGCTATCCTCGATCAAGACGGTAACATTTGGGCTCGGAGTCACAATTTCCATCAGGTCTTGATGGCACAAAGTAGAGCCAAGAGCAAAGGATTTTCATATGTGTTATACCTTGATTCAGTCAACAAGAAAAATTTGGAAGAAGTCTCCTCTTGTAACATTTTTATTGCCAAGAAAATAGAAGAAAAAAAAGATCAAACTCCCACAACAAAGCATAATTCTGCTTTTGAGAATGGGAATCTATCCCGTAAAATCTCCAGTGCAAGCTCCCTTGGAAGCATGGAAGAAAACTATTTTCTTCAAGCATCACAAGATTCATCTGACAATTATTCTGAACGGAGAAACCCAAGAGAACTAAACACGGGTTCTTACTATATGAAGAGCATGACACTCGGTTCTTTTGAGGCTGGACTTGGTTAG 492 0.4024 MSWQVYVDDHLLCDIDIEGNHLPSTAILDQDGNIWARSHNFHQVLMAQSRAKSKGFSYVLYLDSVNKKNLEEVSSCNIFIAKKIEEKKDQTPTTKHNSAFENGNLSRKISSASSLGSMEENYFLQASQDSSDNYSERRNPRELNTGSYYMKSMTLGSFEAGLG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01137 163 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Car06g01137 163 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Car06g01137 163 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Car06g01137 163 SUPERFAMILY Profilin (actin-binding protein) 2 57 IPR036140 -
Car06g01137 163 Pfam Profilin 1 50 IPR005455 GO:0003779
Car06g01137 163 Gene3D Dynein light chain 2a, cytoplasmic 1 103 - -
Car06g01137 163 PANTHER GOLGIN CANDIDATE 5 85 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01137 Car-Chr6 11082134 11084080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01137 1 44 Cytoskeleton Gene Families AT2G19760 63.636 2.51e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01137 K20286 - gmx:100807759 114.005