Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01134 GAAACGGACTCGAAGTTGGGTGGAGCCAAGTTCGGATTGATGAGGTATTACAATCACTGGGCAAACTAGTGAGGCTGTATTCAGAAGTGCATCTATTGAGGTCGTTGAAGCACAATAACATTGTAAGGTACTGTAAGAAACACAAGAAGGTCGACATGAGAGTATTTGTTAAATATCGGACTCAGTGTTTCATTGTCGCAACATGTGATCGTGACTTGAAGAGGAGAATTCGGAAGATTCCTGGTGTGCCAATAATGTACATCACTAAAAAGGTCAAGAGTATTGATGTTCATGATGGTGGTGTTAATGACTTGGGATTTTCATATCCAAACAATAAGCTATGCTTTGTAACTTGTGGAGATGATAAGTTAATAAAGGTATGGGATTTGAATGGAAATAAGTATATACTGCCACATGAAAATGAAAAGCTTTCGCAAGTTGAATTATTAGTTATTGATGAAGCAGCTGCTATTCCACTACCTATGGTGAAGTATTTGCTTGGCCAATATTTGGTCTTCCTGTCTTCTACTGTTAATGGGTCAAGTTTAATGTATCAATTTGTTCATTTTGCTCTTGCCAAGTTATGA 587 0.3765 NGLEVGWSQVRIDEVLQSLGKLVRLYSEVHLLRSLKHNNIVRYCKKHKKVDMRVFVKYRTQCFIVATCDRDLKRRIRKIPGVPIMYITKKVKSIDVHDGGVNDLGFSYPNNKLCFVTCGDDKLIKVWDLNGNKYILPHENEKLSQVELLVIDEAAAIPLPMVKYLLGQYLVFLSSTVNGSSLMYQFVHFALAKL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01134 194 Pfam Helicase 133 179 IPR007807 -
Car06g01134 194 Gene3D - 57 182 IPR027417 -
Car06g01134 194 SUPERFAMILY WD40 repeat-like 61 135 IPR036322 GO:0005515
Car06g01134 194 PANTHER N-ACETYLTRANSFERASE 10 132 180 IPR032672 GO:0008080
Car06g01134 194 ProSiteProfiles Trp-Asp (WD) repeats profile. 94 137 IPR001680 GO:0005515
Car06g01134 194 SUPERFAMILY PIN domain-like 16 94 IPR029060 -
Car06g01134 194 Pfam Fcf1 56 95 IPR006984 GO:0032040
Car06g01134 194 PANTHER RNA CYTIDINE ACETYLTRANSFERASE 132 180 - -
Car06g01134 194 Gene3D Phosphorylase Kinase; domain 1 1 56 - -
Car06g01134 194 SMART WD40_4 87 128 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01134 Car-Chr6 11036757 11039214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01134 2 79 MAP Kinase Kinase Kinase AT3G51630 43.590 1.08e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01134 K14521 - cam:101493627 147.902