Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01129 ATGGAAATGGAAATAATATCAAGAGAAATCATAAAACCCTCCTCACCAACTCCTCCTCACCTCAAAAATTTTCCTCTCTCTTTCATAGATCACATCACTTTCCGCAACTATGTTCCCTTACTTTTCTTTTACGATGATACCAAAGTTTGTGACCAAACATCCAAAATCTCACACCTCAAGAATTCTTTATCTCAAATTCTATCCATATATTACCCCTTTGCAGGTAGGTTCAAAGATCAAGTTTCAATAGAATGCAATGACCAAGGTGTATCGTTTTTAGTCGCAAATATTGGAACAAAATTATCAACAATTCTCCAAAATCCAAATCAAAATTTGTTGAACCCTTTGTTCCCCGATGAATTACAATGGAAGACCGCGAATTGGAGTGAAAGTATATTAGCCATTCAGATAAATTGTTTTGCATGTGGAAGAATTGTAATAAGCGTGTGCGCGTGTCACAAAATTATAGATGCTTCAACTGCTTTTAATTTTGTAAACGATTGGGCCGAAATTAATCGTGAAAAACAAAAGTCAAAGTCAATATTATCGATATTACCATACAACGCACTTTATGCGGGAGGTACAATATTCCCACGTGCGACTTTTCCAATTTTTCCGGAAGTTGAGTTTGTAAAACACGAAGCAATAGTGTGCAAAAGGTTTGTGTTTGAAGCTTCTAAGATAAAGTTACTTAAGGGTATGATGGTAAATTCTCATTCCAACCCGGTGAAAAATCCCACACGTGTAGAAGTTGTTACTGCATTGATTTATAAGTGTGCAGTTTCTGCATTGGGACTAAATTTTAAAACGACGTCGCTTCGAATGGCCGTGGATCTTCGTAGAAGAATGGTTCCTCCGTTGTTGGATAAAAGTGTAGGAAACTTGGTTTGGTTCTTATTTGTTATTAACCCGGAACTACATGATGTGGTATGCAAAATTAGAGAAGGATTGTGTGAGTTTTGTGAGATTTATCCGAAGAAATTTGGAGGGAAGGAAAAGGATTTGTCATTTATATTAGAATGTTTAAAACAAGTTACCACTAATTCAAATGCAGAGAATCAGAGTTTAATAATTTATGCTAGTTGGTGTAGGTTTCCAATGTATGAAGCTGATTTTGGGTGGGGGAAACCAATATGGGTGACAACTAGTGCTTGTCCCGCGAGGAATGCGATAGTTTTGATGGATACGAGAGATGGAGATGGGATTGAAGCCCTTGTGAATATGGAACAGAATGATATGGTCATTTTTCAACGTCACGTGGAACTCTGTCAATATGCCTCTCTTAATCCGAGTATTATAGCTAATGACTCTAACTAA 1317 0.3683 MEMEIISREIIKPSSPTPPHLKNFPLSFIDHITFRNYVPLLFFYDDTKVCDQTSKISHLKNSLSQILSIYYPFAGRFKDQVSIECNDQGVSFLVANIGTKLSTILQNPNQNLLNPLFPDELQWKTANWSESILAIQINCFACGRIVISVCACHKIIDASTAFNFVNDWAEINREKQKSKSILSILPYNALYAGGTIFPRATFPIFPEVEFVKHEAIVCKRFVFEASKIKLLKGMMVNSHSNPVKNPTRVEVVTALIYKCAVSALGLNFKTTSLRMAVDLRRRMVPPLLDKSVGNLVWFLFVINPELHDVVCKIREGLCEFCEIYPKKFGGKEKDLSFILECLKQVTTNSNAENQSLIIYASWCRFPMYEADFGWGKPIWVTTSACPARNAIVLMDTRDGDGIEALVNMEQNDMVIFQRHVELCQYASLNPSIIANDSN 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01129 438 PANTHER F21J9.9 4 433 - -
Car06g01129 438 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 433 - -
Car06g01129 438 Pfam Transferase family 2 422 - -
Car06g01129 438 Gene3D - 1 199 IPR023213 -
Car06g01129 438 Gene3D - 213 426 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01129 Car-Chr6 10972437 10973914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01129 1 418 Monolignol Biosynthesis Gene Families AT5G48930 23.210 6.21e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01129 - - gmx:100806928 528.094