Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01125 ATGGCAATTTTCGATGTTCTATTAGGAACAACAAATGTAACATTCTTCTATGTCATTTTGATATGGGTTTTATTTGATAGTTTAAGATTAACCAAACTTGACAATCTTCTACATTTCAAACACAAACCAACACTTTTTGCTTCAATCACTGTTCTTTTCAGTGCTATTATTTCCATTTTGAACGTAGTTTTTGTTTTCTATGATTACACTAATAGTGGGATTATAGGATTTAACTCTGTTTCTTTAGCTTTAACATGGGTTTTTGCAACTTTGGTTTCATTTTATTCAATGAAGAAAACACTTGGGGAGTGTAAAAGATTCCCTTTTGTTCTAATTCTTTGGTGGGTTTTTGCCACTATTGTTAATATAATCTCACTTTCTTTAAAACTAGTCAAAAATTCAGATTTTTCTGTATTTTTGTTGGAGGAGAACATTGTTGATTCAGTTTCTTTACCCATGCTGTTACTTTTGTGTTTGAATGCACTTCCTAATGTGTGTGTAAAGGAACAAAGTGAAATAGAACAAAGTTTACTTCACAAAGAGTATGAACCTTCTTCCACTTTGGTAGAAGAAGATCAAGAAGAGGCTTTAACAAAAGCTAGTATATGGAGCAAACTCACATTTAGGTGGTTGAATCCAATTTTCAAAATGGGTCGGGTTCAGAAACTTGAATATGTTAATGTTCCTTCTGTTCCTCAATCTGAAACTGCTTCTAGTGCTTCTTCTATGTTGGAAGAATCTATTCGGAAACAGAAACTTGAAGGTGGTTCCTTGACAAAAGCTATTATCCATTCTATTTGGAAATCCTTGGCCTTAAATGCAATTCTAGCAGGTGTTAATACTATTGCTGCATATACTGGTCCATTGTTGATATCTAGCTTTGTGAATTTTTTATTGTCTAATGATAACAATTCAAGCATCCAGTATGGACTGATTCTTGCATTCATTTTCTTCCTCTCAAAGACTGTGGAGTCATTGAGTCAAAGACAGTGGTACTTTGGTGCTCAAAGAATCGGAATTCGCGTACGTGCAGCTCTTATGGCTCTAGTTTATAGCAAGTCTCTAATGATTAAGTGTGGTAGTGGACCAACACATGGTAAAATAATCAATTTGATTAATGTGGATGTTGAAAGAATTGGTGACTTTTGTTGGTATATACATGGAGTTTGGTTGCTTCCATTTCAAATAATTTTGGCTTTGGTGATTTTGTACATAAATTTGGGTTGTATACCTTCCATTGCTGCACTTGGTGTCACAATTTTGGTCATGGTGTGTAACACACCTTTGGCTAACATGCAAGAAGGTTTGCACTCCAAGATAATGGAAGCTAAAGATTCAAGAATCAAAATGACTTCAGAGACTATGAAGAACATCAGAATACTAAAGTTGCATTCATGGGAATCTACATTTCTGCATAAACTCCTCCAACTTAGGGACACAGAGAGAAAGTGGCTGCAGAAATACCTCTTCACATGCTCGGCGATAGCCACTCTATTTTGGACATCTCCTACTTTGGTTTCTGTTTGCACTTTCGGAGCTTGTATATTGGTGAAAACTGAACTAACCGCAGCCACGGTCCTGTCAGCTCTCGCAACTTTTCGCATTTTACAAGAACCGATTTACAATTTGCCTGAGCTTATTTCCATGATAACTCAAACAAAAGTGTCTGTTGATCGAATCTACGAGTTCATTAAAGAGGAAGATCAAAACCAGTTCTTGAATAGGATTGCTCTTGAAGCTTCGACAATCGCTATTGAAATTAAACCAGGTGAGTATGCATGGGAAGCAAATGATTATCCATCCCCCAAAAAACCAACAATTCATATAACTGAAAAATTAATAATAAAGAAAGGTCAGAAGGTGGCCGTTTGTGGACAAGTAGGATCTGGAAAATCAAGCTTGTTTTGCAGTATGCTTGGTGAGATTCCATTGATTTCCGGGGCTGCAACCAAAGTTTATGGAACTAGAAGTTATGTACCTCAAAGTCCATGGATTCAATCTGGAACTATAAGAGAAAATATATTGTTTGGGAAACAAATGAATAAGGAGTTTTATGAAAATGTTGTAGATGGTTGTGCATTGCACCAAGATATCAACATATGGAGTGATGGAGATTTGACCCTTGTGGAGGAAAGGGGGATAAATTTAAGTGGAGGACAAAAACAAAGAATTCAATTGGCAAGAGCTGTTTACAATGACTCAGATATTTATTTCCTTGATGATCCTTTTAGTGCTGTTGATGCTCATACTGGAAGTCATTTGTTTAAGGAATGTCTTATGAAACTTTTATATGATAAAACTGTTGTTTATGCTACACATCAATTGGAATTCTTGGAAGCTGCAGATCTTATTTTAGTTATGAAAGATGGAAAAGTTATTGAGTCGGGAAGGTATAGAGATTTGATGGCATGTCCTTATAGTGAACTTGTGCAACAAATGGCTGCTCATGAAGAAACAGTTAACCAAATTTCATGCCAAGAAGATGATTCTGTTTGCTGTGGACCCTGCCAAAAAAATCCAAATGAAATTGCAGAAGAAAATATTCAAGACATCATCATGGATTGGAAGAGGACGAGAGAAGAGGAAGCGATGACAGGTCGAGTAAAATGGAGTGTTTACTCAACTTTTGTCACATCAGCTTATAAAGGAGCACTTGTTCCTGTTATTCTTCTTTGTCAAATTCTTTTTCAAGTTATGCAGATGGGTAGCAATTATTGGATATCTTGGGCTACTGAAGAAAAGGGCAGGGTCAACAACGGGATCCTTATAGGAATCTTCGCTCTTCTGTCTGGTGGCAGCTCCATATTCATATTGGGAAGGACTGTTTTAATGGCAATGGTTGCCGTCGAGACTGCTCAACGTCTTTTTCATGGAATGATCAAATCAGTTTTCAGGGCACCTGTTTCATTTTTCGATACCACGCCTTCGAGCCGAATTCTGAGTAGGGCATCTAATGATCAAAGTACAATAGACACAGACATACCCTACAGATTAGCTGGCCTGGTCTTTGCACTTATCCAGTTATTGAGTATCATTGTCCTGATGTCACAGGCTGCATGGCAAGTCATTCTTCTCTTTTTTGTGGTTCTTGCTATCTCAATCTGGTATCAGGCTTATTACATCACGACGGCTAGGGAATTGGCCAGGATGGTGGGGATTCGAAAGGCGCCAATCTTGCATCACTTCTCAGAATCAATTGCTGGGGCTGTCACAATCCGTTGTTTCAATCAAGAGAAAATATTCTTGACCAAGGTTATGGCTCTAATTGATGATTATTCTCGGGTCGCCTTTCACAACTATGCCACCATGGAATGGTTGTCTGTTAGAATCAATTTTCTCTTCAATTTGGTCTTCTACTTTGTTCTCATCATCTTGGTTAGTTTGCCAAGGGATGCCATCAATCCAAGCTTGGCAGGTCTTGTTGCTACTTATGGTTTGAACTTGAATGTGCTTCAGGCTTGGGTGATATGGAACCTTTGCAATGTTGAAAACAAAATGATATCAGTAGAGAGAGTATTACAATTCTCTAGTATACCAAGTGAAGCTCCGTTAGTTATACAAGATTGTAGGCCCGAACAAGAGTGGCCTAGGGAAGGAAAAATTGAATTCCATAACCTTCACATACAGTATGATCCCGCTGCTCCAATGGTTCTCAAAGGCGTCACTTGCATCTTCCCGGGGAAGAAGAAAATTGGAGTAGTAGGCCGAACTGGGAGCGGAAAATCTACTCTGGTGCAAGCTCTCTTTCGAGTGGTCGAGCCTTTGGAAGGATTGATAATTATTGATGGTGTACATATTTCCAAGATTGGTCTGCAAGATCTAAGATCTAAGCTTGGCATAATTCCTCAGGATCCGACCTTGTTTTTAGGTACTGTAAGGACTAACTTGGATCCCTTGGAACAGCATACCGATCAAGAACTTTGGGAGGTTCTCAGCAAGTGCCATCTCGCTGAAATAGTACAGAAAGATGCAAGACTTCTGGATGCACCAGTAGCTGAGAATGGAGAAAATTGGAGTGTTGGACAGAGACAACTAGTTTGCCTTGCTAGGGTGCTACTGAAGAAAAGAAGAATTTTAGTCCTAGACGAGGCAACTGCATCGATTGACACTGCAACTGATAGTTTAATTCAGAGGACTATCAGGGAAGAGACAAGTGGATGCACAGTCCTTACAGTAGCACATAGAATTCCTACTGTTATTGATAATGATTTGGTTTTGGTCCTTAATGAAGGGACAATTGTGGAATATGATCAACCAACTCAATTGCTACAGGATAGTTCTTCTTCTTTCTCCAAGTTGGTGTCTGAATTTTTGAGGAGATCATCCCAAAATGAAGTCCAATGTGGATTGAAGACTCCTGATCAattcaaaggataa 4377 0.3831 MAIFDVLLGTTNVTFFYVILIWVLFDSLRLTKLDNLLHFKHKPTLFASITVLFSAIISILNVVFVFYDYTNSGIIGFNSVSLALTWVFATLVSFYSMKKTLGECKRFPFVLILWWVFATIVNIISLSLKLVKNSDFSVFLLEENIVDSVSLPMLLLLCLNALPNVCVKEQSEIEQSLLHKEYEPSSTLVEEDQEEALTKASIWSKLTFRWLNPIFKMGRVQKLEYVNVPSVPQSETASSASSMLEESIRKQKLEGGSLTKAIIHSIWKSLALNAILAGVNTIAAYTGPLLISSFVNFLLSNDNNSSIQYGLILAFIFFLSKTVESLSQRQWYFGAQRIGIRVRAALMALVYSKSLMIKCGSGPTHGKIINLINVDVERIGDFCWYIHGVWLLPFQIILALVILYINLGCIPSIAALGVTILVMVCNTPLANMQEGLHSKIMEAKDSRIKMTSETMKNIRILKLHSWESTFLHKLLQLRDTERKWLQKYLFTCSAIATLFWTSPTLVSVCTFGACILVKTELTAATVLSALATFRILQEPIYNLPELISMITQTKVSVDRIYEFIKEEDQNQFLNRIALEASTIAIEIKPGEYAWEANDYPSPKKPTIHITEKLIIKKGQKVAVCGQVGSGKSSLFCSMLGEIPLISGAATKVYGTRSYVPQSPWIQSGTIRENILFGKQMNKEFYENVVDGCALHQDINIWSDGDLTLVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGSHLFKECLMKLLYDKTVVYATHQLEFLEAADLILVMKDGKVIESGRYRDLMACPYSELVQQMAAHEETVNQISCQEDDSVCCGPCQKNPNEIAEENIQDIIMDWKRTREEEAMTGRVKWSVYSTFVTSAYKGALVPVILLCQILFQVMQMGSNYWISWATEEKGRVNNGILIGIFALLSGGSSIFILGRTVLMAMVAVETAQRLFHGMIKSVFRAPVSFFDTTPSSRILSRASNDQSTIDTDIPYRLAGLVFALIQLLSIIVLMSQAAWQVILLFFVVLAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAVTIRCFNQEKIFLTKVMALIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLIILVSLPRDAINPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERVLQFSSIPSEAPLVIQDCRPEQEWPREGKIEFHNLHIQYDPAAPMVLKGVTCIFPGKKKIGVVGRTGSGKSTLVQALFRVVEPLEGLIIIDGVHISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHTDQELWEVLSKCHLAEIVQKDARLLDAPVAENGENWSVGQRQLVCLARVLLKKRRILVLDEATASIDTATDSLIQRTIREETSGCTVLTVAHRIPTVIDNDLVLVLNEGTIVEYDQPTQLLQDSSSSFSKLVSEFLRRSSQNEVQCGLKTPDQFKG 1458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01125 1458 CDD ABC_6TM_ABCC_D2 886 1176 IPR044726 GO:0140359
Car06g01125 1458 Pfam ABC transporter transmembrane region 272 539 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car06g01125 1458 Pfam ABC transporter transmembrane region 890 1128 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car06g01125 1458 ProSitePatterns ABC transporters family signature. 716 730 IPR017871 GO:0005524
Car06g01125 1458 Gene3D ABC transporter type 1, transmembrane domain 258 570 IPR036640 GO:0005524|GO:0016021
Car06g01125 1458 Gene3D ABC transporter type 1, transmembrane domain 853 1182 IPR036640 GO:0005524|GO:0016021
Car06g01125 1458 SUPERFAMILY ABC transporter transmembrane region 263 567 IPR036640 GO:0005524|GO:0016021
Car06g01125 1458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1194 1427 IPR027417 -
Car06g01125 1458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 804 IPR027417 -
Car06g01125 1458 Gene3D - 1184 1437 IPR027417 -
Car06g01125 1458 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 587 814 IPR003439 GO:0005524
Car06g01125 1458 SUPERFAMILY ABC transporter transmembrane region 888 1183 IPR036640 GO:0005524|GO:0016021
Car06g01125 1458 Pfam ABC transporter 1218 1366 IPR003439 GO:0005524
Car06g01125 1458 CDD ABCC_MRP_domain1 585 791 - -
Car06g01125 1458 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1201 1435 IPR003439 GO:0005524
Car06g01125 1458 SMART AAA_5 617 791 IPR003593 -
Car06g01125 1458 SMART AAA_5 1227 1420 IPR003593 -
Car06g01125 1458 CDD ABCC_MRP_domain2 1199 1419 - -
Car06g01125 1458 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 108 1444 - -
Car06g01125 1458 Gene3D - 583 831 IPR027417 -
Car06g01125 1458 Pfam ABC transporter 613 743 IPR003439 GO:0005524
Car06g01125 1458 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 888 1164 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car06g01125 1458 PANTHER OS01G0902100 PROTEIN 108 1444 - -
Car06g01125 1458 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 271 552 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car06g01125 1458 CDD ABC_6TM_ABCC_D1 272 560 IPR044746 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01125 Car-Chr6 10914810 10921256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01125 590 830 Calmodulin-binding Proteins AT2G36910 30.483 2.08e-23 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01125 - - gmx:100809063 2267.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01125 06 10914810 10921256 Car06g01125 06 10914810 10921256 ECH