Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01118 ATGAGATTCGTGGAAGACAAAGGATGCTATAGTAACCATGGATCAACAGCACAAGATACTCCAAATAGTAGTGCCATCATGTACTCAGAGTTTCACAAAGGAAAAGATGTtactactagtactactactgctactactactactactactCGTGTTTCGAATCACCATCGAATAAATATGGGAAAACCAACACCTTCTAAGTGGGACGATGCACAAAAGTGGCTGGTTGGGTTATCGAAAGGCGGAGAAAAAAGCCAATCAAAAAGCAAACCAAGAAACTCAAATGCAGATGATTTGAGATTGATAGCACCTGTGCCACAAAAGGAGCAGGACTATTCAAGTAGTGAAAAAGAAGAAGAAGAGCATTATGACGATGATCGATGTCGCGAATATGTAGCAGAAGAAACCAAAAAGGTAGAATGTGATGAATCAATTTGGAGAATGAATAACAATAAGGTTTTAGCTGAAAACAAAAACACAATCCATGTTCAATCAATATGTTTTAGAGACATGGGAACTGAGATGACACCTATTGCTAGTCAAGAGCCTTCAAGAACAGCAACACCTATTAGAAACACAACTCCTGCTACTAGAAGTCCTATTCATTCTGGAACTTCAACTCCAATGATGGGTCAAAATGGATTATTGCAAATTGAAGCTGCATCAGGTAATGGAAGCAGCACAACAAGTAGACAATGTGGAGAAGGCTCAATTAGTCCTTGCAAGATGGTTGAAAAGAAGAAGAGTGATGATCAAGTTACAAAATTGAGTCCTCTAGAATGTAGAGCTATGGCTTGGGATGAAGCAGAACGTGCCAAATATATGGCTAGGTTTAAGCGTGAAGAGATGAAGATTCAAGCATGGGAAAATCATCAGATAAGAAAAGCTGAAATGGAAATGAAGAAAATGGAGGTGAAAGCTGAAAGAATGAAAGCTGTGGCACAAGAAAAGTTAACAAATAAACTGGCTGCAACAAGGAGGATAGCTGAAGAGAAAAGGGCAAATGCACAAGTGAAGATGAATGACAATGCTTTGAAGACTACTGAAAGGGTTGAGTATATAAGAAGGACAGGGCATGTACCTTCTTCATTCTCTTTCACTTTTAAGTTGCCTTCCATTTGCTGGTTCGCCCTCTTTCGCTGTTGCATCGCATCGCATAGCTTATTCAATTCTCGCACTTTCCCTTTCAATTACCAATTTTATCTTCGGCGCGGTTATTCAAAAGAGCATGATTCGGTTAGGAATGGTGTCCACAATGATGTGAGGAGTGGGGACAGAGATTCGAGAGATAGGATTAGGTTGAGGCAGAAGGATGTTAGGGAGAGAGAAGATGTCATTAATGGCAGTTACCGGTCATCTTCTTCAAGCCGGAGTGACTCCGGTAGTAGTGGTGGCCTTGGTCCTCGCCGGTGTGGTTTTTCTGTGAAGGCAATCGACAGAGAGCCTGGCGAGCTTTCTAGTGAGAGTGGGTCTGATGGGGCTATTGAATCAGAGTCTGGGGTGAAAGATTGTGAGGTTGCTATGTTTGAAGGAAATAGATCTCGGTCCCCTCCACCACAGGAGAGGAAAAGGAAATTTTCACCGATAGTGTGGGATCACGATGACAAGGAAGTGAAGGAGTTTTCAAAAGTCAGGGTTTCCACCACAAAGGTGACTTCTCTTCCTCCTCTGCCTCGGCTGTCAAAAGCTTCTGTTCTGTCACCGAATACTTCTTATGGTGAAGTTCAAATACGTTCTGACAGGGGCAGAGAAACTGGCGATGTTGAGTTGGCCACAGCAGCTAAGGTTACTTCTGGTTCTCCGTCAGGATTGCGGTCCTTGTCACCAAAACAGACTTGGAGTAATGATCAGGAAGCTGAGCAGCCAGATGGTGAAGATTATGTTCCAACTCGAAATATATCATCTTCAAGATGGGCAGCCGGAGATGACTCTCCTGTTGATGAGGGTGAAATCCTCAATGATGAGGAAATGCCTAAAAGGAAGAGGAGGTTAACTCCTGAGTTGTTAGAGACTAGACTGAGGAACAAGCTATTGAGCCCCAATTATTCTAAAATAGAAGGTATTGAACGAGCTAGAGCCAAATCATCCGATTCAGAAGAAAGAGGTGTTATCCATGGGAGAACATCTAGTGGGGATGGACATCCTGGTCTTGATTCAGAAAAGGATGACTATATGGACATTGATGTTCGAGGTATGAAAAGCGACACCAGTATTAGTCACTCAGATACCGAATCTGAAGATGATAGGGAGGAGACTCCAGAACCTCCAGCTCAACCTCAAAGAATGGTCAATATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAAATAGATGAAGGAACATATGGTGTGGTATATAGAGCTAAAGATAAGAAAACCGGCGAAATTGTAGCATTAAAGAAGGTCAAGATGGAAAAGGAAAAAGAAGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATACATAGTTGATGTCAAGGAAGTAGTGGTCGGAAGTAGCCTCGATAGTATTTTCATGGTAATGGAATACATGGAACATGATCTTAAAGGGTTGATGGAGTCAATGAAGCAACCATTTAGCCAAAGTGAAGTGAAGTGCTTAATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTGAAGACTTCAAACCTGCTTCTAAATAACAGGGGTGAGCTAAAAATTTGTGATTTTGGGTTGGCTCGCCAATATGGGAGTCCTTTGAAACCATATACTCACCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAGCAGTACTCAACAGCTATTGATATGTGGTCTCTTGGTTGTATAATGGCTGAACTATTGTCTAAGGAACCCCTGTTCAATGGAAAAACGGAATTTGACCAACTTGACAAGATTTTCAGAATACTTGGCACTCCAAATGAAACAATTTGGCCTGGCTTCTCAAAATTACCTGGAGTCAAGGTCAATTTTGTCAAGCACCAGTATAATCTTCTGCGTAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTTACTTATGACCCTGAAAAGAGGATCACCGCTGAAGCTGCTCTCAATCATGAATGGTTCCGTGAAGTTCCTCTTCCCAAGAGCAAAGAATTCATGCCTACATTTCCTGCTCAACATGCTCAGGACAGGCGGATGCGGAGAATGTACAAGAGTCCAGACCCTTTAGAAGAGCAGCGACGGAAGGAGTTGCAGCAGGTTTGCATTGTTGAGGAACTTATTGGTTTGAGCAGAGATGGACTTTATTATGCATTAATTAAAGTATCAAAGCAAGCAGGCTCCCTAGAGCTGGGAGATGCGGTTGCTAAGAGATTTAAAGCATCCGGTCTGATGGGCGATATAAATTATGCATTGTAA 3492 0.4172 MRFVEDKGCYSNHGSTAQDTPNSSAIMYSEFHKGKDVTTSTTTATTTTTTRVSNHHRINMGKPTPSKWDDAQKWLVGLSKGGEKSQSKSKPRNSNADDLRLIAPVPQKEQDYSSSEKEEEEHYDDDRCREYVAEETKKVECDESIWRMNNNKVLAENKNTIHVQSICFRDMGTEMTPIASQEPSRTATPIRNTTPATRSPIHSGTSTPMMGQNGLLQIEAASGNGSSTTSRQCGEGSISPCKMVEKKKSDDQVTKLSPLECRAMAWDEAERAKYMARFKREEMKIQAWENHQIRKAEMEMKKMEVKAERMKAVAQEKLTNKLAATRRIAEEKRANAQVKMNDNALKTTERVEYIRRTGHVPSSFSFTFKLPSICWFALFRCCIASHSLFNSRTFPFNYQFYLRRGYSKEHDSVRNGVHNDVRSGDRDSRDRIRLRQKDVREREDVINGSYRSSSSSRSDSGSSGGLGPRRCGFSVKAIDREPGELSSESGSDGAIESESGVKDCEVAMFEGNRSRSPPPQERKRKFSPIVWDHDDKEVKEFSKVRVSTTKVTSLPPLPRLSKASVLSPNTSYGEVQIRSDRGRETGDVELATAAKVTSGSPSGLRSLSPKQTWSNDQEAEQPDGEDYVPTRNISSSRWAAGDDSPVDEGEILNDEEMPKRKRRLTPELLETRLRNKLLSPNYSKIEGIERARAKSSDSEERGVIHGRTSSGDGHPGLDSEKDDYMDIDVRGMKSDTSISHSDTESEDDREETPEPPAQPQRMVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPYIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMESMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRRMYKSPDPLEEQRRKELQQVCIVEELIGLSRDGLYYALIKVSKQAGSLELGDAVAKRFKASGLMGDINYAL 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01118 1163 MobiDBLite consensus disorder prediction 714 746 - -
Car06g01118 1163 MobiDBLite consensus disorder prediction 412 447 - -
Car06g01118 1163 Pfam Protein kinase domain 775 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01118 1163 MobiDBLite consensus disorder prediction 37 60 - -
Car06g01118 1163 MobiDBLite consensus disorder prediction 652 670 - -
Car06g01118 1163 MobiDBLite consensus disorder prediction 412 472 - -
Car06g01118 1163 SUPERFAMILY Protein kinase-like (PK-like) 767 1072 IPR011009 -
Car06g01118 1163 MobiDBLite consensus disorder prediction 179 211 - -
Car06g01118 1163 MobiDBLite consensus disorder prediction 448 463 - -
Car06g01118 1163 Gene3D Phosphorylase Kinase; domain 1 759 857 - -
Car06g01118 1163 MobiDBLite consensus disorder prediction 687 707 - -
Car06g01118 1163 MobiDBLite consensus disorder prediction 481 500 - -
Car06g01118 1163 SMART serkin_6 775 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01118 1163 PANTHER CYCLIN-DEPENDENT KINASE G-2-LIKE 518 1112 - -
Car06g01118 1163 Gene3D Transferase(Phosphotransferase) domain 1 858 1100 - -
Car06g01118 1163 MobiDBLite consensus disorder prediction 546 761 - -
Car06g01118 1163 MobiDBLite consensus disorder prediction 1 23 - -
Car06g01118 1163 MobiDBLite consensus disorder prediction 111 127 - -
Car06g01118 1163 Pfam Remorin, C-terminal region 261 362 IPR005516 -
Car06g01118 1163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672|GO:0006468
Car06g01118 1163 ProSiteProfiles Protein kinase domain profile. 775 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01118 1163 Coils Coil 315 335 - -
Car06g01118 1163 MobiDBLite consensus disorder prediction 595 618 - -
Car06g01118 1163 PANTHER CELL DIVISION PROTEIN KINASE 518 1112 - -
Car06g01118 1163 Coils Coil 293 313 - -
Car06g01118 1163 MobiDBLite consensus disorder prediction 37 127 - -
Car06g01118 1163 CDD STKc_CDC2L1 769 1066 IPR045267 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01118 Car-Chr6 10850663 10862625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01118 766 1111 Core Cell Cycle Gene Families AT5G10270 45.580 7.96e-92 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Car06g01118 Pkinase 2.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01118 K08818 - gmx:100792524 1109.36