Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01086 ATGCTCAAAACGCTAGAGAGGTACCAGAAATGCAACTATGGTGCACCTGAGACTAATGTGTCTACACGAGAAGCCTTGGAGCTAAGCAGTCAACAGGAATATTTGAAGCTGAAGGCACGTTATGAAGCATTACAACGGTCCCAGAGGAACCTTATGGGAGAAGATCTTGGGCCTCTGAGCAGCAAAGAGCTGGAGTCGCTTGAAAGGCAGCTAGATACGTCCTTGCAGCAAATAAGATCAACAAGGACACAATTCATGCTGGATCAGCTCTCTGATCTTCAACGCAAGGAACATATGCTAAGCGAGGCTAACAGGTCTCTTAGACAAAGGCAGTTGGAACGGTATCAATTAAATCAACTCCAAATGAATCATTGTGTTGAAGAGATGGGCTATGGTCGACATCCAAGTCAAACTCATGGTGATGGCCTCTTTCAACAAATGGAGTGTGAACCAACGTTACAAATTGGTTATCAGGCTGATCCAGGGTCAGTGGTGGCGGCAGGGCCAAGCATGAGTAATTACATGGCAGGATGGTTACCATAA 543 0.4586 MLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGPLSSKELESLERQLDTSLQQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRQLERYQLNQLQMNHCVEEMGYGRHPSQTHGDGLFQQMECEPTLQIGYQADPGSVVAAGPSMSNYMAGWLP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01086 180 Coils Coil 64 84 - -
Car06g01086 180 Coils Coil 90 110 - -
Car06g01086 180 Pfam K-box region 29 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
Car06g01086 180 PANTHER SERUM RESPONSE FACTOR HOMOLOG 2 164 - -
Car06g01086 180 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL9 HOMOLOG 2 164 - -
Car06g01086 180 ProSiteProfiles K-box domain profile. 27 123 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01086 Car-Chr6 10503784 10514437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01086 1 180 MADS-box Gene Family AT1G24260 63.784 7.01e-66 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01086 - - gmx:100805078 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02000 05 65308171 65313879 Car06g01086 06 10503784 10514437 PCT