Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01026 ATGGCTAGACGAATGGTTGCATTCAGCACTGAACCACGTGGAATATTGGAGATCAATGTGTTGCTTAATGTTACCACATCAATTGTACTAGAAGAAGAAAATTTAATGGAGCAATATCATCATCGTGATTATAATATTAATTGTCAACAAAATGTGGGTTCCTTAAAGAAATCTGAAGTTGATCAGCCTCTTTCTTGTGATTCTAAAGATCCATGTTCAATTTGTTTGGAGGAGTACGGTAATGGGTCAAATTTAGAACTCGTTTATACAAAATGTTTACATGTTTTTCATAAGGAGTGTCTTGACAAGTGGGTTAGTCAATTATGCACCAATCAATCGTCTTCTTATTCTTGTCCATTGTGTCGATCTAAGATAATATGA 381 0.3438 MARRMVAFSTEPRGILEINVLLNVTTSIVLEEENLMEQYHHRDYNINCQQNVGSLKKSEVDQPLSCDSKDPCSICLEEYGNGSNLELVYTKCLHVFHKECLDKWVSQLCTNQSSSYSCPLCRSKII 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01026 126 Pfam Ring finger domain 72 122 IPR001841 -
Car06g01026 126 PANTHER RING ZINC FINGER PROTEIN-RELATED 19 126 - -
Car06g01026 126 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 19 126 - -
Car06g01026 126 ProSiteProfiles Zinc finger RING-type profile. 72 122 IPR001841 -
Car06g01026 126 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 126 IPR013083 -
Car06g01026 126 SUPERFAMILY RING/U-box 71 125 - -
Car06g01026 126 SMART ring_2 72 121 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01026 Car-Chr6 9969400 9969780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01026 72 126 C3H Transcription Factor Family AT4G00305 36.364 8.56e-09 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01026 K15694 - cam:101489650 218.394