Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01017 ATGGATTCCAATTCCCATGGTAATCTCGATGAGCAGATTTCTCAGCTCATGCAGTGCAAACCCTTGTCTGAGCAAGAGGTAAGGGTCTTGTGTGATAAGGCGAAAGAAATTTTGATGGAAGAAAGCAATGTCCAGCCTGTAAAAAGTCCTGTTACAATTTGTGGTGATATTCATGGGCAATTCCATGATCTTGCCGAGCTTTTCCGCATTGGAGGCAAGTGTCCAGATACAAACTACTTGTTTATGGGAGATTATGTTGACCGTGGCTATTATTCTGTCGAAACCGTAACGCTTTTGGTCGCCCTTAAAGTGCGTTACCGGCAGCGTATTACTATTTTGAGGGGGAATCATGAAAGTCGCCAGATTACTCAAGTTTATGGATTTTATGATGAGTGCCTACGGAAGTATGGTAGTGCTAATGTTTGGAAGATGTTTACTGATTTGTTTGACTACTTCCCATTGACAGCATTGGTTGAATCTGAAATATTTTGTCTTCATGGTGGGTTATCCCCATCTATTGAAACCCTTGACAACATTCGTAATTTTGATCGTGTGCAAGAAGTTCCTCATGAGGGACCCATGTGTGATCTTCTATGGTCTGATCCGGATGATCGCTGTGGTTGGGGAATCTCTCCTAGAGGTGCCGGGTACACATTTGGCCAGGACATATCTGAGCAGTTTAACCACACAAATAATTTGAAGCTGATTGCTAGAGCTCACCAGCTGGTTATGGAAGGATATAACTGGGGTCACGATCAAAAGGTGGTTACCATATTCAGTGCACCTAATTATTGCTATCGCTGTGGGAACATGGCATCCATCCTTGAAGTTGATGATTGCAAAGGACACACATTCATTCAGTTTGAGCCAGCTCCAAGGAGGGGAGAGCCAGATGTAACCAGGAGAACCCCTGACTACTTCCTATGA 927 0.4369 MDSNSHGNLDEQISQLMQCKPLSEQEVRVLCDKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKMFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01017 308 PRINTS Serine/threonine phosphatase family signature 50 77 IPR006186 GO:0016787
Car06g01017 308 PRINTS Serine/threonine phosphatase family signature 79 106 IPR006186 GO:0016787
Car06g01017 308 PRINTS Serine/threonine phosphatase family signature 112 136 IPR006186 GO:0016787
Car06g01017 308 PRINTS Serine/threonine phosphatase family signature 147 173 IPR006186 GO:0016787
Car06g01017 308 PRINTS Serine/threonine phosphatase family signature 176 203 IPR006186 GO:0016787
Car06g01017 308 PRINTS Serine/threonine phosphatase family signature 232 252 IPR006186 GO:0016787
Car06g01017 308 PRINTS Serine/threonine phosphatase family signature 254 270 IPR006186 GO:0016787
Car06g01017 308 Gene3D - 1 308 IPR029052 -
Car06g01017 308 SMART pp2a_7 22 292 IPR006186 GO:0016787
Car06g01017 308 CDD MPP_PP2A_PP4_PP6 8 292 - -
Car06g01017 308 Pfam Calcineurin-like phosphoesterase 50 241 IPR004843 GO:0016787
Car06g01017 308 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2 308 - -
Car06g01017 308 ProSitePatterns Serine/threonine specific protein phosphatases signature. 113 118 IPR006186 GO:0016787
Car06g01017 308 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 2 308 - -
Car06g01017 308 SUPERFAMILY Metallo-dependent phosphatases 7 293 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01017 Car-Chr6 9891074 9902079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01017 14 238 Calmodulin-binding Proteins AT5G63870 34.082 5.87e-32 119