Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00999 ATGGCTTCTCCTGGTGGAGCATATTCATCTGGAACAAGCTCTCTTCAAAACTCTGGATCTGGATCAGAGGGAGATATTCAACAACAACAGGTGCATGTTATGGATCAAAAGAAAAGGAAGAGAATGCAATCGAATAGGGAATCGGCACGAAGATCAAGAATGAAGAAACAACAACACATGGAAGATCTTAACAACCAAATTGAATATCTAAAAAAAGAGAACAATCAAATAAGCAGAAACGTAGGGGTAACTACTCAGATGTACCTGAACGTGGAAGGTGAGAATGCGATTCTTAGGGTTCAGATGGCTGAACTTAGCAACAGGTTGCAATCGCTGAATGATATCATAAATTACATTGAATCAAGCAATTCATTGTTTCAGGAGACTGATCAATTGTTTAATGATTGTGGATTCTTCGATACATGGAACTCTTTTCCTGTTAATCAACCAATCATGGCTTCTGCTGACATGttgatgtactga 483 0.3768 MASPGGAYSSGTSSLQNSGSGSEGDIQQQQVHVMDQKKRKRMQSNRESARRSRMKKQQHMEDLNNQIEYLKKENNQISRNVGVTTQMYLNVEGENAILRVQMAELSNRLQSLNDIINYIESSNSLFQETDQLFNDCGFFDTWNSFPVNQPIMASADMLMY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00999 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 35 81 IPR004827 GO:0003700|GO:0006355
Car06g00999 160 SUPERFAMILY Leucine zipper domain 37 89 IPR046347 GO:0003700|GO:0006355
Car06g00999 160 Pfam bZIP transcription factor 37 87 IPR004827 GO:0003700|GO:0006355
Car06g00999 160 MobiDBLite consensus disorder prediction 32 66 - -
Car06g00999 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 159 - -
Car06g00999 160 Coils Coil 46 80 - -
Car06g00999 160 Coils Coil 95 115 - -
Car06g00999 160 CDD bZIP_plant_GBF1 38 88 IPR045314 GO:0003700|GO:0006355
Car06g00999 160 MobiDBLite consensus disorder prediction 1 31 - -
Car06g00999 160 SMART brlzneu 33 97 IPR004827 GO:0003700|GO:0006355
Car06g00999 160 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 1 159 - -
Car06g00999 160 Gene3D - 35 91 - -
Car06g00999 160 MobiDBLite consensus disorder prediction 1 66 - -
Car06g00999 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 40 55 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00999 Car-Chr6 9719447 9721153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00999 33 160 bZIP Transcription Factor Family AT4G34590 51.825 6.12e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car06g00999 bZIP_1 1.1e-10 CL0018