Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00987 ATGGAGAAGAACAACTCATTCAATAAAAAAGATAACCCAAATCTTCTATTGGGTCGTTTCGAGTTAGGAAAACTCCTCGGCCATGGAACCTTCGCTAAAGTCCACCTCGCCAAAAACATCAAAACAGATGAATCTGTTGCAATCAAAATCATAAACAAAGAAAAAATCCTAAAGGTCGGTTTAGTTTCACATATCAAACGAGAAATCTCCATTCTCCGCCGTGTTCGCCACCCCAACATCGTTCAACTCTTCGAAGTTATGGCTACGAAGACAAAGATCTACTTTGTCATGGAGTATGTGCGAGGTGGCGAGCTTTTCAACAAGGTTGCTAAAGGTAGGTTGAAAGAACAAGTTGCAAGGAAGTATTTTCAGCAATTAATCTGTGCCGTTGATTTTTGTCATGCTAGAGGTGTTTTTCATAGAGATCTAAAACCTGAAAATTTGTTGCTTGATGAAAATGGTAACCTTAAAGTTTCAGATTTTGGACTTAGTGCTGTGTCTGATCAAATTAGGCAAGATGGGTTGTTTCACACTTTTTGTGGTACACCTGCTTATGTTGCTCCTGAGGTTTTGGGTAGAAAAGGTTATGATGGTGCTAAGGTTGATATTTGGTCTTGTGGGGTTGTTTTGTTTGTTCTTATGGCTGGTTATTTACCTTTTCATGATGGTAATGTTATGGCTATGTATAAGAAGATTTATAAAGGTGAATTTAGGTGTCCAAGATGGTTTTCACCTGAATTAACTACCCTTTTAACTAGGCTTCTTGATATCAAACCGAAAACAAGGATTTCTATTCCAGAGATTATGGAGAATAGTTGGTTTAAGATAGGTTTTAAGCATATAAAGTTTTATGTTGAGGATGATGTTGTTTGTAACTTTGACGATTCTCTTGATTTTGATGATGATAAGATAGTTAATATTGATGATAATAGTCGTGTAAATGTTGGCGATGAagaaacattattagcatcggtatcagaatcagaatcggaGGATTTTGAGGTTGTGAATAGAAGGAGGAATCGTGGTTCGTTGCCTAGGCCTGCAAGTTTGAATGCTTTTGACATTATATCGTTTTCGCAAGGTTTTGATCTTTCTGGGTTGTTTGAGGAAAAGGGCGACGAGGCGAGGTTTGTGTCGGGTGCATCGGTGTCAAAGATTATGTCAAAATTGGAGGAGGTTGCCCAATTGGTTAGGTTCAATGTGAGGAAGAAAGATTGCAAGGTTAGCTTGGAGGGTTCTAGAGAAGGGGTAAAAGGGCCATTGACTATTGCTGCTGAGGTATTTGAGTTGACACCTTCTTTGGTGGTTGTGGAAGTGAAGAAAAAAGGAGGAGATAAGGTTGAGTATGATAGATTTTTAAACTCTGAATTGAAACCTGCTTTGCATAGTTTAATTGTGGAGGAATCTGGTGGTTCTTCATGTCAAACTACAGCAGCTGAAGCTTTGCAACAACGTGCATTTTCTGACTCTGCCCTTGATAAACATTCAGATAGTATTGAATCTTTAGACTGA 1515 0.3749 MEKNNSFNKKDNPNLLLGRFELGKLLGHGTFAKVHLAKNIKTDESVAIKIINKEKILKVGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEQVARKYFQQLICAVDFCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLGRKGYDGAKVDIWSCGVVLFVLMAGYLPFHDGNVMAMYKKIYKGEFRCPRWFSPELTTLLTRLLDIKPKTRISIPEIMENSWFKIGFKHIKFYVEDDVVCNFDDSLDFDDDKIVNIDDNSRVNVGDEETLLASVSESESEDFEVVNRRRNRGSLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSGASVSKIMSKLEEVAQLVRFNVRKKDCKVSLEGSREGVKGPLTIAAEVFELTPSLVVVEVKKKGGDKVEYDRFLNSELKPALHSLIVEESGGSSCQTTAAEALQQRAFSDSALDKHSDSIESLD 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00987 504 PANTHER - 14 469 - -
Car06g00987 504 Gene3D Transferase(Phosphotransferase) domain 1 10 341 - -
Car06g00987 504 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Car06g00987 504 Pfam NAF domain 348 404 IPR004041 GO:0007165
Car06g00987 504 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00987 504 Gene3D Kinase associated domain 1, KA1 348 468 - -
Car06g00987 504 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00987 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Car06g00987 504 SUPERFAMILY Protein kinase-like (PK-like) 16 275 IPR011009 -
Car06g00987 504 CDD CIPK_C 352 462 - -
Car06g00987 504 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 469 - -
Car06g00987 504 Coils Coil 493 504 - -
Car06g00987 504 ProSiteProfiles NAF domain profile. 346 370 IPR018451 GO:0007165
Car06g00987 504 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00987 Car-Chr6 9609964 9611560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00987 15 491 CBL-interacting serine-threonine protein kinases AT4G18700 74.004 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car06g00987 Pkinase 1.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00987 - - gmx:100807567 736.487