Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00986 ATGGAATGTATATGGGATCGATTTGGATTATGGCTCAGAGTTTATGTTGGATTGATTTCTCTCTGGGGAATTCAACAGTGCTGGTCTCTGAATGATGAAGGATTTGCTTTGTTGGAATTTCGGATTAGAATAACTTCTGATCCTCATGGTGCTCTGCTGAATTGGAATCCAAATGATTCCAATCCTTGCAAGTGGTTGGGTGTTCATTGTGTTGATGGTAAAGTGCAAATGCTGGACCTAAATGGGCTATCATTAGAAGGGACATTGACTCCTCATCTTGGGAAACTTGATCACTTAAAATCTCTTGTGTTATGCAAGAACAATTTTTCTGGCACCATTCCTAAAGAACTTGGAGATCTAGAAAAGCTGGAGTTGTTGGATTTAAGGGAGAATAATTTGACTGGAAATATCCCTGCAGAAATCAGCAGGATGTTGTTGTTAAAACAATTGTTGGTTCATGAAAATAAAATTGAAGTCAACGATTCTCAAGAGCTCAGGAGCATAGGGCTGCCTACCAAATCACTATTTATTGACAACTATTCATCACCTCTGACAAGTTTCTTTCAGTGCAAGAATAGAAAGTTTGCACATTGTGTTTGGTATAGAGATCTCAAGCAATGGAACAAAGCAGATTCTTTAGCTGTTCCAATTAAAGGAGCACTTAAAAGATGCTTTGATGTCATGTCGCTGCCATTGCCACTGTTCAAGCTAGGAAAGGCTACCTCTCATGACTCTGAAGAGAATTACTGTGGCAATCTGCGTAGTTCTGATGAGTCGGAGATTGACCCAAATTTATCGAATCTAATCAGTTCTGCACGTCGTAAGTTGCTTGATCAGTCCAGTAACCTTGCAGCTGCACCTTTTAGTGGCGAACCTGCTATACAGATCAGTCTTATTCCGATTTCCATAAGTAGTGGATCTTTCCCAGCTGTGCCAGATGCCAATAAGAAGCAAAATCAGTTAGCTGCACCACTACATTCACCTACTGATTTTCCACATGATAATCAAACAAGTCAACCAAATTCAGCTAATGGTGCTCCAGGAAAACTCTGGAAATATATTATTGTTATCTCTGGCGTGGCTGCTTTGGTCATTTTAATTGTGATCATGCTTTGCATCTTGCGAAAACGAGCTGCAAGAGTAATCAAGCCCTGGAAGACAGGAATAAGTGGGCAGTTGCAGAAGGCATTTGTAACAGGGGTCCCGAAGTTGAATCGAGCAGAGTTGGAGACAGCATGTGAAGATTTCAGCAATATCATTAACAGTTTTGAGAAGTGCACAGTATATAAAGGAACACTGTCCAGTGGAGTCGAGATTGCTGTTGATACTACTATTGTTACTTCTTCTCAGGATTGGTCAAAGAACATGGAGATGGCCTATAGGAGAAAGATTGATGCTCTATCCCGCGTTAACCATAAGAACTTCACCAATCTTATTGGTTACTGTGACGAAGAAGAACCATTCGCAAGGATGATGGTGTTTGAGTATGCTCCAAATGGAAGCGTATTCGAGCATCTGCATGTTAAGGAAGTTGAACATCTTGATTGGAGTGCAAGGATGAGGGTTATCATGGGAACAGCTTATTGTCTTCAGTACATGCACCATGATCTGAATCCACCAATAGCTCATTCCAACCTCAATTCAGTTTCTATATTATTAACTGATGACTTTGCTGCTAAGATTTCAGAGATCAGTTTTGGCAATAATGGATTATCACCAGCCAGCACACCTGGAGATGAATCAAAGAAATCTGATTTGCCACCCCAACAAGGTCCCGAAATCGATGTCTATAACTTTGGAATGTTGTTACTTGAAATCATTTCAGGGAAACTACCTTACTCTGAAGAACAAGGCCATCTTGCGAATTGGGCTGCTGACCACTTGAATGATAAGCGAAGCTTCGGCTGTTTGATTGATCCCACGCTCGAGTCCTTCAAAGACATTGAACTTGATGTCATATGTGAGGTGATCAAAGATTGTCTTCAACCTGATCAAAGGTTAAGGCCAACAATGAAGGAAGTAGCTTCGAAATTGAGGGATGTGCTTTCTATATCACCTGAGCAAGCAGTCCCTAGACTTTCTCCACTCTGGTGGGCTGAACTAGAGATCTTGTCGGTGGAGGCCACTTAA 2130 0.4117 MECIWDRFGLWLRVYVGLISLWGIQQCWSLNDEGFALLEFRIRITSDPHGALLNWNPNDSNPCKWLGVHCVDGKVQMLDLNGLSLEGTLTPHLGKLDHLKSLVLCKNNFSGTIPKELGDLEKLELLDLRENNLTGNIPAEISRMLLLKQLLVHENKIEVNDSQELRSIGLPTKSLFIDNYSSPLTSFFQCKNRKFAHCVWYRDLKQWNKADSLAVPIKGALKRCFDVMSLPLPLFKLGKATSHDSEENYCGNLRSSDESEIDPNLSNLISSARRKLLDQSSNLAAAPFSGEPAIQISLIPISISSGSFPAVPDANKKQNQLAAPLHSPTDFPHDNQTSQPNSANGAPGKLWKYIIVISGVAALVILIVIMLCILRKRAARVIKPWKTGISGQLQKAFVTGVPKLNRAELETACEDFSNIINSFEKCTVYKGTLSSGVEIAVDTTIVTSSQDWSKNMEMAYRRKIDALSRVNHKNFTNLIGYCDEEEPFARMMVFEYAPNGSVFEHLHVKEVEHLDWSARMRVIMGTAYCLQYMHHDLNPPIAHSNLNSVSILLTDDFAAKISEISFGNNGLSPASTPGDESKKSDLPPQQGPEIDVYNFGMLLLEIISGKLPYSEEQGHLANWAADHLNDKRSFGCLIDPTLESFKDIELDVICEVIKDCLQPDQRLRPTMKEVASKLRDVLSISPEQAVPRLSPLWWAELEILSVEAT 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00986 709 PANTHER LRR RECEPTOR-LIKE KINASE 1 709 - -
Car06g00986 709 SMART serkin_6 423 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00986 709 MobiDBLite consensus disorder prediction 570 590 - -
Car06g00986 709 Pfam Protein tyrosine and serine/threonine kinase 426 678 IPR001245 GO:0004672|GO:0006468
Car06g00986 709 Gene3D Transferase(Phosphotransferase) domain 1 497 690 - -
Car06g00986 709 PANTHER PROTEIN MALE DISCOVERER 2 1 709 - -
Car06g00986 709 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Car06g00986 709 Gene3D Phosphorylase Kinase; domain 1 385 496 - -
Car06g00986 709 ProSiteProfiles Protein kinase domain profile. 414 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00986 709 SUPERFAMILY L domain-like 40 158 - -
Car06g00986 709 MobiDBLite consensus disorder prediction 319 344 - -
Car06g00986 709 SUPERFAMILY Protein kinase-like (PK-like) 401 677 IPR011009 -
Car06g00986 709 Gene3D Ribonuclease Inhibitor 29 213 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00986 Car-Chr6 9601699 9607815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00986 78 681 Receptor kinase-like Gene Family AT5G56040 26.677 4.56e-40 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Car06g00986 PK_Tyr_Ser-Thr 7.9e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00986 - - gmx:100808098 1004.2