Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00985 ATGAAAATGTCAGATGGAAGTGAGAATCATGAGAATGAAAGGAGTGGGAATAAGAGTGAAGAACAAGGTGAGGACACTTCAATGGGATCTTCATCACATAATAATAAGTGCTCAATATCATTTGACTTGAATGAAGAAGCAAGTAGTGATGAAGataaaattaacaacaagaataataataataataatGAAGCATGTGATGATGAGAAAAATGAAAAGGATGATGATGAAGAAGGTACTTCAAGTTCAACAAAAAATAGAAGTAGTGAAAGAAGAAATGGTGTGAGACAATATGTAAGATCAAAGATGCCTAGACTTAGGTGGACTCCTGATCTTCATCACTCATTTGTGCATGCTGTTGAAAGGCTTGGGGGACAAGAGAGAGCAACACCAAAATTGGTGCTTCAGCTTATGAATGTGAGAGGACTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGACGAATCTGGACAAGTGCTAAGTCCAACACACAGATCAACCTATGAGCTAGGTCGTATTTCTCATGTACCTCATCAGTCCATGATTCCTCATCAACATTTCAAGATGGCAAATGGTGGAATTATACTAGAAACTAACTACAACCACCACAATTATAATTTCCATTCACTCCTGCATCCCTCATCCTTATCACATTCACATTCAAAGACCATCAATCCAAGGCACAATCAATGGTACTTAAATCAATCTTCAAGACCAAGCTACATCAGCAATGAAATTATCTCCTCAACAGCCTTACATACGCAAGGAAGATCAATAGCTAATTCTAACCAACTTCAACTAATGGATACTACTACTACCACCACCACACTTGCTCCTATGAGACCAAGCCAATTTCTTGAAGAGAAAAGGTGGCCACCATTAGATATCTTCAACAATCATCATTGGAGAAAAAATTTACATACCAATGTTTCTACTAATACTACTGGACCACAATCTTTTGCATATCATCAATTTGGCTCCGCTACATCAACATCACTTAGACCAAATGAGGTGAGCTTTGGAAACAACACAAGAATAAACAGGGAAAATCTATCAAGCATCAATGAGCACCACAACTATTTCCACAATTCAAAGCTAGAATTTGATCCTCCATTTAGGATTAAGTTGGATGAAGAAACATTGCATAAAGACAAAAAATGGGTGCCTGATTTACAACTGAGTTTAAGTCAAACAAATGACAAGAATGATGGCAAGAGTGATGGTTTCAGAGAAATCAACACCAAACTCTCACTTTCTTAG 1281 0.3692 MKMSDGSENHENERSGNKSEEQGEDTSMGSSSHNNKCSISFDLNEEASSDEDKINNKNNNNNNEACDDEKNEKDDDEEGTSSSTKNRSSERRNGVRQYVRSKMPRLRWTPDLHHSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSPTHRSTYELGRISHVPHQSMIPHQHFKMANGGIILETNYNHHNYNFHSLLHPSSLSHSHSKTINPRHNQWYLNQSSRPSYISNEIISSTALHTQGRSIANSNQLQLMDTTTTTTTLAPMRPSQFLEEKRWPPLDIFNNHHWRKNLHTNVSTNTTGPQSFAYHQFGSATSTSLRPNEVSFGNNTRINRENLSSINEHHNYFHNSKLEFDPPFRIKLDEETLHKDKKWVPDLQLSLSQTNDKNDGKSDGFREINTKLSLS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00985 426 MobiDBLite consensus disorder prediction 76 97 - -
Car06g00985 426 MobiDBLite consensus disorder prediction 403 426 - -
Car06g00985 426 MobiDBLite consensus disorder prediction 22 44 - -
Car06g00985 426 Gene3D - 103 160 - -
Car06g00985 426 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 104 159 IPR006447 GO:0003677
Car06g00985 426 Pfam Myb-like DNA-binding domain 106 156 IPR001005 -
Car06g00985 426 MobiDBLite consensus disorder prediction 1 21 - -
Car06g00985 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 160 IPR017930 -
Car06g00985 426 SUPERFAMILY Homeodomain-like 102 158 IPR009057 -
Car06g00985 426 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 426 IPR044848 GO:0003700
Car06g00985 426 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 9 426 - -
Car06g00985 426 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00985 Car-Chr6 9588846 9593937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00985 93 163 G2-like Transcription Factor Family AT2G42660 80.282 2.73e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car06g00985 Myb_DNA-binding 8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00985 - - mtr:MTR_8g086410 558.525