Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00981 ATGAAGCGCTTTTACAGATTCTTAATTCTTCTATCCCTTTTTTCTTTAGTAGAATCTTCATGCAACAGTAAAGACCATAGCTTAATTTCAAACGCTTTCAAATCTGTCTCTGGGTTCAACACTTCGACTTTTAACTGTTCAGATTCTCAAATCAGCAAAATAGTTCTTCCCTCCAAAAACCTAAGAGGAACAATTTCATGGGGCTATCTAAAAAACATGTCAAACTTGCAAATCCTTGATCTCTCTGGAAATTCCCTACAAGGCCACGTACCAAGTTGGTTTTGGTCAAGTTTTTCATCTTTATTACAAGTGAACCTCTCAGGAAACAAATTTGGAGGAAGCATCATTATTGAATTCAACACCTCGTTTTCAACCATTCAAAATCTCAACCTCTCACACAACAGGTTCAACAATTTAGTTCAACTTTCTGGTTTCACAAACCTTAAAATCCTCGACCTTTCTCACAACAAACTAAAAACATTACCCTTCGGGTTCCAAAATATCACAAAACTACAACACCTTGACCTTTCAAGTTGCAATCTCAAAGCTAACATAAAACCCATTTCTTCTTTACACTCACTTCACTACTTAGATTTATCAAACAACACATTAACCGGTAATTTCCCTTCTGATTTTCCACCACTTAACATTCTCAAATTCTTAAACATTTCACACAATAACTTCACCTTTAACAACAACaaatctaaaactccaaaacaaacaaaaccaaaatccaaaaGATTGATTTTTGTAGTGTGTTCTACACTATCATCACTTGTATTGGCAATTATTTTCATTTGGGTAATCAGAATTATTCTCAAAAAGAGGAAAGAACGTTGTATGAAGAAATGGGCCATTTCGTTACCGGTTATTACAATGAACACGAAGGTGGAGAAAACAGGGCCGTTTGAGTTTGAAACAGAGTCAGGATCAACATGGGTTGCTGATTTGAAAGAACCAACTTCTGCACCGGTGGTGATGTTCGAGAAGCCATTGATGAACTTCACATTCAAGGATCTAATAGTTGCCACGTGTGGGCCTGTGTATTCGGCCGTGTTACCAGGAGATATCCACGTGGCGATTAAGGTTCTTGAACACGCTAGAGACGTTGATCGTGATGACTTTGTGGACATGTTTGTTGACTTGTCGAAGCTGAAGCATCCTAACTTGCTGACTCTCTCAGGTTACTGTATTGCAGGTAAAGAGAAGCTAGTGCTGTACGAGTTTATGGCAAACGGCGATTTAGGTAGATGGCTACACGAGCTTCCAACAGGGGACACCAACGTGGAAGACTGGAGTGGCGACACATGGGAGTTACAAAACGACGTCGTTGAAGCATCTCCGTCAAATATGGGTTGGCTGACACGTCATCGTATCGCGGTAGGAATAGCACGTGGTCTCGCCTATCTCCACCACGCGGGTTCAAAACCCGTCGTGCACGGCCACCTCGTTACCTCCAACATTTTACTCGCCAATAATTTCGAGCCTCGAATCTCCGATTTTGGATTGCGAATCGATCCGAATCCAAATGGCGGCATCCAAGCTGACGTGTACTGTTTCGGGGTGGTATTGATTGAGCTACTGACAGGGAGGGCCGGTACGGTGGAGACAGTTGTTGCGGTTAGAAAGGCAGTGAAGGAGGGACAGGGTGTTAGAATGCTTGATGAAAGACTGAGACTCGGTGGTGACTCAGTGGTGAGTGAGATGGAGGAGAGCCTTCGAGTCGCTTTCTTGTGCACGATCGACTCACCTTCCAAGAGGCCCACCATGCAGCAGGTTTTGGGCTTACTCAAAGACATTTGTTCTCATCAACAACTCGAAACGAGTTGA 1830 0.4175 MKRFYRFLILLSLFSLVESSCNSKDHSLISNAFKSVSGFNTSTFNCSDSQISKIVLPSKNLRGTISWGYLKNMSNLQILDLSGNSLQGHVPSWFWSSFSSLLQVNLSGNKFGGSIIIEFNTSFSTIQNLNLSHNRFNNLVQLSGFTNLKILDLSHNKLKTLPFGFQNITKLQHLDLSSCNLKANIKPISSLHSLHYLDLSNNTLTGNFPSDFPPLNILKFLNISHNNFTFNNNKSKTPKQTKPKSKRLIFVVCSTLSSLVLAIIFIWVIRIILKKRKERCMKKWAISLPVITMNTKVEKTGPFEFETESGSTWVADLKEPTSAPVVMFEKPLMNFTFKDLIVATCGPVYSAVLPGDIHVAIKVLEHARDVDRDDFVDMFVDLSKLKHPNLLTLSGYCIAGKEKLVLYEFMANGDLGRWLHELPTGDTNVEDWSGDTWELQNDVVEASPSNMGWLTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLANNFEPRISDFGLRIDPNPNGGIQADVYCFGVVLIELLTGRAGTVETVVAVRKAVKEGQGVRMLDERLRLGGDSVVSEMEESLRVAFLCTIDSPSKRPTMQQVLGLLKDICSHQQLETS 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00981 609 Gene3D Transferase(Phosphotransferase) domain 1 511 608 - -
Car06g00981 609 Gene3D Transferase(Phosphotransferase) domain 1 410 510 - -
Car06g00981 609 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 233 604 - -
Car06g00981 609 Gene3D Phosphorylase Kinase; domain 1 307 409 - -
Car06g00981 609 ProSiteProfiles Protein kinase domain profile. 334 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00981 609 SMART LRR_typ_2 145 167 IPR003591 -
Car06g00981 609 SMART LRR_typ_2 191 214 IPR003591 -
Car06g00981 609 SMART LRR_typ_2 73 96 IPR003591 -
Car06g00981 609 Gene3D Ribonuclease Inhibitor 13 118 IPR032675 -
Car06g00981 609 PRINTS Leucine-rich repeat signature 191 204 - -
Car06g00981 609 PRINTS Leucine-rich repeat signature 148 161 - -
Car06g00981 609 Gene3D Ribonuclease Inhibitor 119 246 IPR032675 -
Car06g00981 609 Pfam Leucine rich repeat 125 181 IPR001611 GO:0005515
Car06g00981 609 Pfam Leucine Rich Repeat 75 94 IPR001611 GO:0005515
Car06g00981 609 PANTHER KINASE, PUTATIVE-RELATED 3 229 - -
Car06g00981 609 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 229 - -
Car06g00981 609 PANTHER KINASE, PUTATIVE-RELATED 233 604 - -
Car06g00981 609 SUPERFAMILY Protein kinase-like (PK-like) 345 600 IPR011009 -
Car06g00981 609 ProSiteProfiles Leucine-rich repeat profile. 147 169 IPR001611 GO:0005515
Car06g00981 609 SUPERFAMILY L domain-like 46 232 - -
Car06g00981 609 Pfam Protein tyrosine and serine/threonine kinase 346 505 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00981 Car-Chr6 9555601 9558974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00981 53 600 Receptor kinase-like Gene Family AT5G07280 30.317 1.04e-59 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Car06g00981 PK_Tyr_Ser-Thr 7.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00981 - - gmx:100788556 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00981 06 9555601 9558974 Car06g00981 06 9555601 9558974 ECH
Car06g00981 06 9555601 9558974 Car01g00424 01 3336225 3339981 PCT