Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00970 ATGAAAAGTAAATTCAACAACCCACATAGGAGTACTCAACAAGAAGACATAGCTCAAGATTCCCCTCCTTCTTCAACCGCTTTTAACACTTCCCTCTCTTCTTCATCATCTAAGAAAAGTAGGCGAAGCATACAGAAAAGGGTGGTGCAAATCCCAATAAAGGAAAATGAAGGAACAAGGCTAAAAGGAGAGAGCAATACCCCACCCTCTGATTCATGGGCATGGAGAAAGTATGGACAGAAACCCATCAAAGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTGCAAAGGTTGTCCAGCGAGGAAACAAGTGGAGAGGAGCCGTGTGGACCCCACAATGCTCGTCATAACCTACTCCTCAGACCACAACCATCCCTGGCCGGTTTCAAGAAATAATAGACCCAAGTCCCAACTGGACCCGGTCGAACCGGATCACAAAACTGTCGACCAACTTTGCGGAGATGACTTGGGGTGGTTGGTTCAAATTGATACGACGTCGTCGGTTATTCTGGAAAGCCCGATTATGGCGGAGTTTGATGATGACGTGGCTTCCGTGTTTTTACCAATGGGGGAAGAGGATGAGTCGCTTTTCGCTGACCTTGGAGAATTGCCCGAGTGCTCAACGGTGTTCCGGCATGGGTTGTTGGATTCACGGCGGCGGTTAACGGCTCCGTAA 684 0.4868 MKSKFNNPHRSTQQEDIAQDSPPSSTAFNTSLSSSSSKKSRRSIQKRVVQIPIKENEGTRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSCKGCPARKQVERSRVDPTMLVITYSSDHNHPWPVSRNNRPKSQLDPVEPDHKTVDQLCGDDLGWLVQIDTTSSVILESPIMAEFDDDVASVFLPMGEEDESLFADLGELPECSTVFRHGLLDSRRRLTAP 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00970 227 PANTHER OS01G0750100 PROTEIN 11 140 - -
Car06g00970 227 PANTHER OS01G0750100 PROTEIN 157 220 - -
Car06g00970 227 SMART WRKY_cls 69 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00970 227 Pfam WRKY DNA -binding domain 71 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00970 227 SUPERFAMILY WRKY DNA-binding domain 67 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g00970 227 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 140 IPR044810 GO:0003700
Car06g00970 227 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 157 220 IPR044810 GO:0003700
Car06g00970 227 Gene3D WRKY domain 58 131 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g00970 227 ProSiteProfiles WRKY domain profile. 70 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00970 227 MobiDBLite consensus disorder prediction 1 39 - -
Car06g00970 227 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00970 Car-Chr6 9421881 9423915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00970 7 215 WRKY Transcription Factor Family AT1G29280 56.250 7.02e-82 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car06g00970 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00970 - - cam:101493438 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00970 06 9421881 9423915 Car06g00970 06 9421881 9423915 ECH