Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00964 ATGCATCATGAAAGAGAATACATCTGTCTTCTCATTCTCTTTATGATATCCACTTTTTTCTTACCATCTTTAACAGCTGACACAGAAGCTCAAATTCTAATCAACTTCAAAAGCTTCTTAACCAATGCAGATGCTTTAAATAATTGGAGTAATGATTCTAATAGTGTATGCACTTGGACTGGTTTAATATGTATCAATCAAAGTACACTTCATGGTTTGAGATTAGAGAATATGGAACTAAGTGGAACAATTAATGTAGACATTCTTCAAGAATTGTCAACTTTGAAGAGTTTTAGTGTCATTAACAATAGTTTTGAGGGTTCAATGCCTTCATTCAAGAAACTTGTGGGATTAAGGGCATTGTTTTTGACCAATAACAAGTTTTCTGGTGAAATTCCTGATGATGCTTTTGAAGGATTAAGAAGACTCAAGAGAGTATTCTTAGCGGGAAATGAGTTCAAGGGTCATATTCCTACATCACTTGCTCAATTGCCTAGACTTTATGATGTTGATTTACATGGAAATAGTTTTGATGGTACTATACCAGAATTTCTACAGAGTGGTTTCAGAGTGTTTAATTTATCTAATAATCGATTGGAGGGTATAATACCAAAACTCTTCAGAAATGAGGATCCAAGTTCTTTTGCAGGCAACAAAGGTCTATGTGGAAATCCTCTAAGCCTCCCCTGCAACCAAAGCCACGTACCCTTAAGTGTTCCACATGAAAAAGAAGATAAGAAACACAATGTTCATATCAGTATTATTGTATTTGTGGTTGTGCTTGTATTGGCTTCAATACTAGTACTTTTGTTCATCCGTTACCACAGGAAAAAAACTGCAGCAAAACCGAAATGGACAGAGAAAGCAGAATCACAGTCTCATAACACCAACAGCACAAGTGAGGCCAAATCAATTAACATATCAGTTGAATCAAGGAAAAGTGAAGACTTGAACTTTGTAAGGAATGAAAGTGTGGCTTTTGATTTGCAAGATTTGTTAAGGGCCTCAGCTGAGGTTCTAGGAAGTGGTAGTTTTGGTTCAACTTATAAGGCTATGATATTGACAGGAGCAGTTGTGGTTGTGAAAAGATTTAAACACATGAACAGAGTTAGTAAGAAAGAGTTTTTTGATCATATGAGAAAGCTTGGAAGGTTGACACATCCTAATCTTCTACCTCTTGTTGCATTCTATTATGGAAAAGAAGAGAAGCTTTTGATACATGACTTTGCACAAAATGGTAGCTTGGCTAGTCATCTTCACGGTAGACATGGTAATGAGTTGGATTGGGCAACACGTTTGAAGATAATAAAAGGAGTAGCAAGAGGTTTATCTCACCTTTACAGAGAGTTTCCAGATGAAAAAGTACCACACGGACATCTGAAATCATCAAATGTAGTATTAGATAATTCATTTGAGCCTCGTTTAACAGAATACGGACTGGCAAGAATAATAGAAAAGAATCACGCTCAACAGTTCATGGCAGGGTTCAAATCACCAGAGGCAAGTAAACAGGATGAAGGTCCAAATGAAAAAAGTGATGTGTGGTGTTTGGGGATATTGATATTGGAGATATTAACGGGGAAATTTCCAGCAAATTATTTGAGGCATGGGAAAGGAGCGAGTGAGGATTTGGCAATGTGGGTTGAATCAATAGTGAAGGAAGGGTGGAGTGGGGAAGTGTTGGATAAAAGTATTGGTGGGAGTAAGGATGGAGAAGGTGAGATGTTGAAGTTGTTGAGAATTGGGATGGGTTGTTGTGAATGGAGTTTGGAGAATAGGTGGAGTTGGAAGGAGGCAGTGGCTAAGATTCAAGACTTGAATGAAAGGGATCATGTTCAACTTCATCATTCTGATTTCTCTTCCTCCAGCCAAACTTAA 1878 0.3738 MHHEREYICLLILFMISTFFLPSLTADTEAQILINFKSFLTNADALNNWSNDSNSVCTWTGLICINQSTLHGLRLENMELSGTINVDILQELSTLKSFSVINNSFEGSMPSFKKLVGLRALFLTNNKFSGEIPDDAFEGLRRLKRVFLAGNEFKGHIPTSLAQLPRLYDVDLHGNSFDGTIPEFLQSGFRVFNLSNNRLEGIIPKLFRNEDPSSFAGNKGLCGNPLSLPCNQSHVPLSVPHEKEDKKHNVHISIIVFVVVLVLASILVLLFIRYHRKKTAAKPKWTEKAESQSHNTNSTSEAKSINISVESRKSEDLNFVRNESVAFDLQDLLRASAEVLGSGSFGSTYKAMILTGAVVVVKRFKHMNRVSKKEFFDHMRKLGRLTHPNLLPLVAFYYGKEEKLLIHDFAQNGSLASHLHGRHGNELDWATRLKIIKGVARGLSHLYREFPDEKVPHGHLKSSNVVLDNSFEPRLTEYGLARIIEKNHAQQFMAGFKSPEASKQDEGPNEKSDVWCLGILILEILTGKFPANYLRHGKGASEDLAMWVESIVKEGWSGEVLDKSIGGSKDGEGEMLKLLRIGMGCCEWSLENRWSWKEAVAKIQDLNERDHVQLHHSDFSSSSQT 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00964 625 Gene3D Phosphorylase Kinase; domain 1 298 409 - -
Car06g00964 625 Pfam Protein kinase domain 337 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00964 625 PANTHER LRR RECEPTOR-LIKE KINASE 11 613 - -
Car06g00964 625 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 613 - -
Car06g00964 625 MobiDBLite consensus disorder prediction 290 305 - -
Car06g00964 625 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Car06g00964 625 SUPERFAMILY Protein kinase-like (PK-like) 338 607 IPR011009 -
Car06g00964 625 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Car06g00964 625 Gene3D Ribonuclease Inhibitor 25 233 IPR032675 -
Car06g00964 625 MobiDBLite consensus disorder prediction 282 305 - -
Car06g00964 625 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Car06g00964 625 Gene3D Transferase(Phosphotransferase) domain 1 410 623 - -
Car06g00964 625 ProSiteProfiles Protein kinase domain profile. 334 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00964 625 SUPERFAMILY L domain-like 36 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00964 Car-Chr6 9387148 9390424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00964 1 607 Receptor kinase-like Gene Family AT4G31250 43.272 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car06g00964 Pkinase 1.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00964 - - gmx:100803999 822.387