Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00963 ATGGGAAGCCAAGATGTGAAGTTGGTGAGCTTTTGGGTGAGTCCATTTGCTAAGAGGGTTGAGTGGGCCTTGAAACTTAAGGGTGTTGATTATGAGTATATAGAAGAAGATATATTCAACAAAAGTAATCTCCTTTTGGAATTGAACCCGGTTCACAAGAAGGTTCCGGTTCTTGTCCATGCCCAAAAGCCAATTGCAGAGTCATTTATTATTCTTGAATACATTGATGAAACATGGAAGCAATATCCATTGCTACCTTCCCATCCTTATCAAAGAGCTCTTGCTCGCTTTTGGGCTGATTTTGCTGAACAAAAGCTTTTGAATGTAGCATGGGTTGCTATGTGTACCAGTGGGGAAGACCAGGAAATAGCTCTAAAGCAAGCCAGAGAAGCAATAGAGAAAATAGAAGAGGAGATAAAGGGGAATAAATTCTTTGGAGGGGATAATATTGGGTACCTTGACATTGCACTTGGATGGATTTCTTATTGGCTTCCTGTTTTTGAGGAAGTTGGGTCTAAGCAGATAATAGACCCATTGAAATGTCCAGCCATCACTGCATGGATGGCTAATTTTCTCAGCCACCCTGTGATCAAGGACAGCTTGCCCCCAAGAGACAAGATGCTTGTTTACTTTGAGTCTCGCAGAGAGGCATTGTCTGAGGCATTTAATGGATGGTTCAAGGTTTAG 687 0.4192 MGSQDVKLVSFWVSPFAKRVEWALKLKGVDYEYIEEDIFNKSNLLLELNPVHKKVPVLVHAQKPIAESFIILEYIDETWKQYPLLPSHPYQRALARFWADFAEQKLLNVAWVAMCTSGEDQEIALKQAREAIEKIEEEIKGNKFFGGDNIGYLDIALGWISYWLPVFEEVGSKQIIDPLKCPAITAWMANFLSHPVIKDSLPPRDKMLVYFESRREALSEAFNGWFKV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00963 228 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Car06g00963 228 Coils Coil 118 138 - -
Car06g00963 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 217 IPR010987 -
Car06g00963 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Car06g00963 228 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Car06g00963 228 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Car06g00963 228 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Car06g00963 228 CDD GST_N_Tau 6 79 - -
Car06g00963 228 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Car06g00963 228 Pfam Glutathione S-transferase, C-terminal domain 108 195 IPR004046 -
Car06g00963 228 Gene3D Glutaredoxin 1 84 - -
Car06g00963 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 219 IPR045073 -
Car06g00963 228 Gene3D - 85 221 - -
Car06g00963 228 PANTHER GLUTATHIONE S-TRANSFERASE 1 219 - -
Car06g00963 228 SFLD Main (cytGST) 2 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00963 Car-Chr6 9381542 9384752 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00963 2 219 Glutathione S-transferase Gene Family AT2G29420 44.037 1.16e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00963 K00799 - gmx:100816011 373.244