Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00950 ATGCTATCTAAGATCTTCTTAGCTTTCTCAATCATTTCATTTACTTGTTTCAGTTATGCAGAATCTAAACTACCTCAGCATGAAATTGATGCTCTTGAAGAAATCACTAGAACAATGGGTGCCACCTATTGGAAGTTTGATGGTGATTCATGTCAAATTAAAATGGTTGGTTTAACGCAAGAGCCACCTGATGGATCTCAAAGCAGCATTGAATGTGATTGCTCTTCTCAAAATGACACCTTTTGTCATGTTGTAAGGATTACATTAAAGGGGTACAACCTTCCTGGCACGCTTCCGTCCCAATTGATTAAGCTTCCGTACCTCAGAGAAGTTGATTTTGCTTTGAACTACCTAAATGGTACGATACCGAAGGAATGGGCTTCAATTAAACTAACTTCAATCTCTCTACTTGTTAATCGTTTATCAGGGGAAATTCCTAAAGAGTTGGGAAATATTACCACTCTAACATACCTGAACCTTGAAGCAAACCAATTTTTTGGTGTTGTTCCCTCTGAACTTGGAAGTCTATTAAACCTGCAAACTTTGATTTTATCATCGAATAATTTTTTTGGGAACTTACCAGAAACATTTGCTCAGTTACAAAATTTGACAGATTTTAGGATAAATGATAATAGTTTCAATGGAAAAATACCTAACTTCATACAGAATTGGAAACAACTTCAGAGACTAGAAATGCATGCAAGTGGATTGGAGGGACCTATCCCATCAAATATATCTCTTTTGACTAATTTATCTCAATTGAGGATTAGTGACATAACTGGTCCAAGTCAGGATTTTCCTGTTTTGAGCAACATGACAGGAATGATAAGATTGATTTTCAGGAATTGCAATATTACTGGAGAGATACCTAGCTATTTCTGGACAATGAAGAAATTGGAAATGTTGGATCTCAGTTTCAATAATTTGTTTGGGCAAATACCAAATATTGTTCATGTGGGACATCTGAGATTTGTCTTCCTAACTAGCAACAAGCTTAGTGGTAATGTACCTGACTCAATCTTGATGGATGGAAGCAATGTTGATCTTTCTTACAACAACTTTACATGGCAAGGACCTGGAAAATCTGCTTGTGGAGATTACCTgaatttaaacctaaaCTTGTTCCGGAGCTCCTTAGGGACCAATGCATTACAGGGGTTTCTTCCGTGTTCACAAACTTTGAACTGTCCTTCATATTCAAGTTGTTTGCATGTTAATTGTGGTGGAAAGGATATACAAGTGAAGGAAAATGGTGAAAATATTCTCTATATTGGAGATGGAGATGTTGTAGGTGGTACTGCTAAATATTATAATGATTATGAAAATCACTGGGGATTTAGTAGCACTGGAGACTTCATGGATGATGGTGATTCCCAAAATACACGTTACTCCAGGTCTTTGTCATCTTTGAGTATACCGGAACTATATACAACAGCTCGCGCCTCTCCAATTTCACTTACTTATTTTCACTATTGCTTGGAAAATGGGAAATATACTGTGCATCTCCACTTTGCAGAAATACAATTTACAAATGATAAGACATATAGAAGTCTTGGGAAGCGCTTCTTTGACATCTATGTTCAGGGAAGATTGGTTTGGAAGGATTTTAGTATTGAAGATAAATCGCACCTTGCTCAAAAACCACGTATATTATCAGCATATAATGTCACTGTAACAGACGGTATTCTGGAGATTCGATTCTACTGGGCAGGCAAGGGGACTACAAGGATTCCTGTTGATGGAGTTTATGGTCCCCTTATATCGGCTTTCTCTATTGTTTCTGACTCTAAATCATGTTCAATCCATAATAGTGGAAGGCATAAAATGGTCATTGGAGTAGGTTTTGGAGTTACAGCTCTGTGCCTAATCCTTATTATGATAGGATTTTCTTGGAGGAAAGGCTATATCAAAGGAATAATGAGAAGAGAAGAAGTTTTCGAAGGGCGAGATTTTCAGATGAGGGCATTTACGTTAAAACAAATTAGAGCTGCCACAGATGGTTTCAGTCCCACTAATAAGGTTGGGGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAATTATCTGATGGTACATGGGTAGCTGTTAAACAACTCTCTTCAAAGTCACGGCAGGGAAACCGTGAATTTTTAAACGAGATAGGGATGATATCTTGTTTGCAACATCCTAATCTTGTGAAACTTCATGGATGTTGCATTGAAGGGGATCAATTAATATTGGTCTATGAGTACATGGAAAATAATAGCCTGGCCCATGCCTTATTCAGTTCAGAAAATCAGCTTAAACTTGAATGGCCATCAAGGCTTAGGATCTGCATTGGCATAGCAAAAGGTCTTGCATTTCTTCACGAAGAATCAAGACTCAAGGTTGTTCATCGAGATATTAAAGCTACTAATGTGTTACTGGATGGGAATTTAAACCCTAAAATATCTGATTTTGGGTTGGCTAGGCTTGATGAAGAGGAGAAGACCCATGTCATCACCCGAGTGGCGGGCACAATAGGATACATGGCACCGGAATATGCTTTGTGGGGTTACTTGAGTTACAAGGCTGATGTTTACAGTTATGGAGTCGTGGTTTTGGAAACTGTTAGTGGAAAGAGTAATAACAATTACATGCCAAGTGAGAATTGTGTTTGTCTCTTAGACAAGGCATTATATCTGGAACAGACTGAAAACCTTATGCAACTGGTTGATGAGAGGTTGGGATCAGAGGTAAACCCAACTGAAACAAAAAATATCCTGAAAGTAGCTCTCTTGTGCATTAATCCCTCCCCATCGCTTAGGCCTACGATGTCTGAGGTTGTAAACATGCTTGAAGGAAGAATAAGCATTCCAGATGTTGTCCCAGAAAGTAATGCTTTCAATGAAGATATAAGGTTTAAAGCCATGAGGGACATCCATCAAAACAAGGAAGGTCATAGTTTGAGCACAAGCCGGACAGACGATTCAACAGGACACCTTACACATAGCACTCCCTCAGTATTTGGCAATGATTTACAAGAGATAACCTCCGAGTCATAA 3021 0.3836 MLSKIFLAFSIISFTCFSYAESKLPQHEIDALEEITRTMGATYWKFDGDSCQIKMVGLTQEPPDGSQSSIECDCSSQNDTFCHVVRITLKGYNLPGTLPSQLIKLPYLREVDFALNYLNGTIPKEWASIKLTSISLLVNRLSGEIPKELGNITTLTYLNLEANQFFGVVPSELGSLLNLQTLILSSNNFFGNLPETFAQLQNLTDFRINDNSFNGKIPNFIQNWKQLQRLEMHASGLEGPIPSNISLLTNLSQLRISDITGPSQDFPVLSNMTGMIRLIFRNCNITGEIPSYFWTMKKLEMLDLSFNNLFGQIPNIVHVGHLRFVFLTSNKLSGNVPDSILMDGSNVDLSYNNFTWQGPGKSACGDYLNLNLNLFRSSLGTNALQGFLPCSQTLNCPSYSSCLHVNCGGKDIQVKENGENILYIGDGDVVGGTAKYYNDYENHWGFSSTGDFMDDGDSQNTRYSRSLSSLSIPELYTTARASPISLTYFHYCLENGKYTVHLHFAEIQFTNDKTYRSLGKRFFDIYVQGRLVWKDFSIEDKSHLAQKPRILSAYNVTVTDGILEIRFYWAGKGTTRIPVDGVYGPLISAFSIVSDSKSCSIHNSGRHKMVIGVGFGVTALCLILIMIGFSWRKGYIKGIMRREEVFEGRDFQMRAFTLKQIRAATDGFSPTNKVGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIGMISCLQHPNLVKLHGCCIEGDQLILVYEYMENNSLAHALFSSENQLKLEWPSRLRICIGIAKGLAFLHEESRLKVVHRDIKATNVLLDGNLNPKISDFGLARLDEEEKTHVITRVAGTIGYMAPEYALWGYLSYKADVYSYGVVVLETVSGKSNNNYMPSENCVCLLDKALYLEQTENLMQLVDERLGSEVNPTETKNILKVALLCINPSPSLRPTMSEVVNMLEGRISIPDVVPESNAFNEDIRFKAMRDIHQNKEGHSLSTSRTDDSTGHLTHSTPSVFGNDLQEITSES 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00950 1006 SUPERFAMILY L domain-like 69 339 - -
Car06g00950 1006 Gene3D Ribonuclease Inhibitor 194 262 IPR032675 -
Car06g00950 1006 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 63 982 - -
Car06g00950 1006 SUPERFAMILY Protein kinase-like (PK-like) 651 939 IPR011009 -
Car06g00950 1006 ProSiteProfiles Protein kinase domain profile. 668 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00950 1006 Pfam Protein tyrosine and serine/threonine kinase 672 938 IPR001245 GO:0004672|GO:0006468
Car06g00950 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Car06g00950 1006 MobiDBLite consensus disorder prediction 978 1006 - -
Car06g00950 1006 MobiDBLite consensus disorder prediction 969 1006 - -
Car06g00950 1006 SMART serkin_6 668 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00950 1006 Pfam Malectin domain 402 590 IPR021720 -
Car06g00950 1006 PANTHER RECEPTOR-LIKE KINASE IN FLOWERS 1-RELATED 63 982 - -
Car06g00950 1006 CDD STKc_IRAK 674 940 - -
Car06g00950 1006 Gene3D - 400 597 - -
Car06g00950 1006 Gene3D Ribonuclease Inhibitor 41 193 IPR032675 -
Car06g00950 1006 Gene3D Ribonuclease Inhibitor 263 363 IPR032675 -
Car06g00950 1006 Gene3D Transferase(Phosphotransferase) domain 1 744 947 - -
Car06g00950 1006 Gene3D Phosphorylase Kinase; domain 1 637 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00950 Car-Chr6 9296030 9304274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00950 6 833 Receptor kinase-like Gene Family AT1G29750 59.928 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car06g00950 PK_Tyr_Ser-Thr 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00950 - - vra:106779815 1412.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00950 06 9296030 9304274 Car06g00950 06 9296030 9304274 ECH