Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00943 ATGCCAGGGAACAATTACTGTCCTCCTTTAACACCAAGATCAAGATTGGAAAGGCTTTTGAGAGAAAGAGAGTTAAGGAAATCGAGCAGGTATATTGATGGCAATAAAGATGCAGAATACAATGATTCATTCATAAGTGAGAATGATGTTCAAAATGAGGAAGAGTTCGCGGAAACGGCGGTTGCGGACGAGAGGCCTCGCAAACAACGTTTGTTGGTGGTAGCTAATAGGTTGCCTGTCTCTGCTGTTAGGGAGGGTGTGGATTCATATCACCTTGAGATCAGTGTTGGTGGCCTAGTCAGTGCACTTTTAGGCAAGAAAAATGAATTTGACACCAGATGGATTGGGTGGGCTGGTGTGAATGTGCCTGATGAAGTTGGACAAAGAGCTTTGACTAAAGCTTTAGCTGAAATGCGATGCATCCCTGTGTTTCTTGATGAGGAGATAGTTAATGAGTACTACAATGGTTATTGCAACAACATCTTGTGGCCACTATTTCATTACCTTGGACTTCCACAAGAGGATAGACTCGCTACCACTCGCAGTTTCCAAACTCAGTTCGACGCGTATAAGAAGGCGAACCAAATGTTTGCTGATGTAGTGAATAAACATTATGAGGATGGAGATGTTGTTTGGTGCCATGATTACCACCTAATGTTTCTTCCAAGATGTTTGAAAGAATACAATGACAAAATGAAAGTTGGATGGTTTCTCCATACACCTTTTCCTTCCTCAGAAATACATAGGACTCTGCCATCAAGATCAGAACTTTTGAGATCTGTACTTGCCGCTGATCTGGTCGGATTTCATACTTACGATTATGCTAGGCATTTTGTAAGTGCTTGTACTCGAATTCTTGGGATAGAAGGTACACCAGAAGGAGTTGAGGATCAAGGGAAGCTAACTCGTGTGGCTGCGTTTCCTATTGGAATTGATTCCGAAAGATTTATTCGAGCCCTTGACCTTCCTGAAGTCCAGAATCGCATGAAAGAATTGAAAGAAAGATTTGCAGGCCGAAAGGTAATGTTGGGTGTTGATCGTCTTGATATGATAAAAGGAATTCCTCAGAAAATTTTAGCATTTGAGAAGTTCCTCGAGGAGAATTCTCATTGGCGCGATAAAGTTGTCTTGCTGCAAATTGCTGTACCTACAAGGACAAATGTTCCTGAATATCAAAAGCTTACGAGTCAGGTGCATGAAATTGTAGGACGCATCAATGGAAGATTCGGAACACTTACTGCTGTCCCAATACACCATCTGGATCGGTCACTTGACTTTCATGCATTGTGTGCACTCTATGCTGCTACTGATGTAGCCCTTGTTACATCATTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCGTGTCAAGCTTCCAAGAAGGGAGTTCTCATTTTAAGTGAGTTTGCAGGTGCAGCACAGTCACTTGGTGCTGGTGCTATCTTGGTAAATCCATGGAACATCACAGAGGTTGCTGCTTCTATTGGTTATGCTTTGGATATGCCAGCTGACGAAAGAGAAAAACGGCATCAGTTTAATTTCAAGCATGTAACAACTCATACATCACAAGAATGGGCTGCAACTTTTGTGAGCGAACTGAATGATACCATTGTTGAAGCTCAGCTTAGAACAAGACAAGTTCCTCCATTACTTCCCAATAAAGTGGCAGTTGATTGTTACTCAAAATCCAATAACCGGTTAATCATACTGGGTTTCAATGCCACTCTGACTGAACCAGTGGATGGTCTTGGAAGCGGTGGTCAGATTAAAGAATTAGAACTTAAAGTACACCCAGATCTGAAGGAACCTTTGAAGAAGTTATCTGATGATCCAAAGACAACAATAGTTGTTCTGAGTGGGAGTGGTAGAGCTGTCCTGGACAAAAACTTCGGTGAATACAATATGTGGTTGGCAGCAGAAAATGGGATGTTTTTGCGGCTTACTTCAAGTGAGTGGATGACAACCATGCCTGAAAATTTAAACATGGATTGGGTTGATAGTGTAAAGCATGTTTTTGAGTACTTTACTGAAAGAACCCCTAGATCTCATTTTGAGCTTCGTGAGACTTCAATTATATGGAACTATAAGTATGCGGATGTTGAGTTTGGAAGGCTTCAAGCAAAAGATCTGCTTCAGCATCTTTGGACAGGGCCAATATCAAATGCATCTCTTGATGTTGTCCAAGGTGGTCGATCTGTTGAGGTTCGTGCAGTTGGTGTGTCAAAGGGGGCAGCTATTGATCGTATCCTAGGAGAGATAGTTCATAACAAAGGCATGAAGGAACCAATTGATTATGTCCTATGCATTGGGCACTTTCTAGCAAAGGATGAAGATGTCTATAAATTTTTCGAGCCAGAGCTCCCTTCTGAATCATCACCAATGGCAAGAGCTATGATATCCAATTCTTACAGGCCATCATCTCTGCCAAGATTTTCAGCCAGCAAAAGTGGTTCTAAAGCATCTCACTATAAGAAGCAACGTTCCCTGTCAAATATAGAAATTGACCGTGCAAGTGACCGTGCAAGTGCTTGGAGACAAACAGGTCGTGATAGAATATCACTAAATGAGGGTTCTTCAGTTCTTGATCTTAAAGGTGATAATTATTTCTCTTGTGCTGTTGCACGAAAGAGATCAAGTGCTCGCTACCTTCTTAAAACCTCACATGATATTGTCAGTCTCTTAAGTGACCTGGCAGATCATTCTTCATCACCATCAACTTAA 2727 0.4162 MPGNNYCPPLTPRSRLERLLRERELRKSSRYIDGNKDAEYNDSFISENDVQNEEEFAETAVADERPRKQRLLVVANRLPVSAVREGVDSYHLEISVGGLVSALLGKKNEFDTRWIGWAGVNVPDEVGQRALTKALAEMRCIPVFLDEEIVNEYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQTQFDAYKKANQMFADVVNKHYEDGDVVWCHDYHLMFLPRCLKEYNDKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGIEGTPEGVEDQGKLTRVAAFPIGIDSERFIRALDLPEVQNRMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSHWRDKVVLLQIAVPTRTNVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAATDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALDMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPNKVAVDCYSKSNNRLIILGFNATLTEPVDGLGSGGQIKELELKVHPDLKEPLKKLSDDPKTTIVVLSGSGRAVLDKNFGEYNMWLAAENGMFLRLTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFELRETSIIWNYKYADVEFGRLQAKDLLQHLWTGPISNASLDVVQGGRSVEVRAVGVSKGAAIDRILGEIVHNKGMKEPIDYVLCIGHFLAKDEDVYKFFEPELPSESSPMARAMISNSYRPSSLPRFSASKSGSKASHYKKQRSLSNIEIDRASDRASAWRQTGRDRISLNEGSSVLDLKGDNYFSCAVARKRSSARYLLKTSHDIVSLLSDLADHSSSPST 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00943 908 Gene3D - 596 754 IPR023214 -
Car06g00943 908 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 69 539 - -
Car06g00943 908 Gene3D Glycogen Phosphorylase B; 61 317 - -
Car06g00943 908 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 53 898 IPR001830 GO:0003824|GO:0005992
Car06g00943 908 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 70 536 IPR012766 GO:0003825|GO:0005992
Car06g00943 908 Gene3D - 660 740 - -
Car06g00943 908 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 53 898 - -
Car06g00943 908 Pfam Glycosyltransferase family 20 70 536 IPR001830 GO:0003824|GO:0005992
Car06g00943 908 CDD GT20_TPS 70 536 IPR001830 GO:0003824|GO:0005992
Car06g00943 908 Pfam Trehalose-phosphatase 595 800 IPR003337 GO:0003824|GO:0005992
Car06g00943 908 CDD HAD_TPP 569 788 - -
Car06g00943 908 Gene3D Glycogen Phosphorylase B; 318 520 - -
Car06g00943 908 SUPERFAMILY HAD-like 569 756 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00943 Car-Chr6 9237822 9244694 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00943 1 906 Trehalose Biosynthesis Gene Families AT1G78580 74.450 0.0 1393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00943 K16055 - gmx:100816642 1530.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00943 06 9237822 9244694 Car06g00943 06 9237822 9244694 ECH