Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00920 ATGGCAATGAATAATAGACGGTTAGAATTTGGGAGGCCTGTCTCAAGTAAAAGAAGATTGAAGGATTTGTTGGTTCAGAAAGATAATCGCTTTTGTGCTGATTGTGGTGCTCCAGATCCTAAATGGGCGTCAGCCAATATTGGGGTTTTTGTTTGCTTAAAATGTTGTGGAGTGCACAGAAGTCTTGGTACTCATATATCAAGGATTTTGTCTGTGACATTGGATGAATGGTCAAATGATGAAATAGATGCAATGGTGGAAGTTGGAGGAAATGCTTCTGCTAATTCGATATATGAGGCATATATTCCAGAAGGATGTACAAAACCTGGACCAGATGCTAGTCATGAGCAACGTGTAAAATTCATCAGGTCAAAGTATGAGCGTCAAGAATTTTTGAAACATAGTTTGCGCATTGTATCAACAAAAAGCAATCGTCAATCAAGTTTTTCTAAAAAGATTATGGATAGCTTTCGAAGTACTAGTGGTTCAAAGAATATGGAAGGAATGGTAGAATTTATGGGAATGTTGAAGGTGAAAGTGGTCAATGGCACAAATTTAGCAATCAGAGATATGATGTCAAGCGATCCATATGTTGTTTTGAAGCTTGGACAACAGACTGTTCAGACAGCTGTAATAAAGAGTAATTTGAATCCAGTTTGGAATGAGGAGCTTATGTTATCTGTTCCTCAGCAATTTGGACCACTGAGTATGAGGGTATTTGATCATGACTTGTTTTCAGCTGATGATATAATGGGAGAAGCAGAGATTGATCTTCAACCTTTAATAACATCTGCAATAGCATTTGGAGATGCTGGAATGTTTGATGATATGCAGATAGGAAAATGGTTGAaatccaatgacaatgcacttatagaagatagcattgtcaatatcattgatggtaaggttaaacaagACATTTCAATCAAGCTCCAAAATGTCGAATGTGGAGAAATATACTTAGAACTTGAGTGGATATGTCTTGAATAA 990 0.3465 MAMNNRRLEFGRPVSSKRRLKDLLVQKDNRFCADCGAPDPKWASANIGVFVCLKCCGVHRSLGTHISRILSVTLDEWSNDEIDAMVEVGGNASANSIYEAYIPEGCTKPGPDASHEQRVKFIRSKYERQEFLKHSLRIVSTKSNRQSSFSKKIMDSFRSTSGSKNMEGMVEFMGMLKVKVVNGTNLAIRDMMSSDPYVVLKLGQQTVQTAVIKSNLNPVWNEELMLSVPQQFGPLSMRVFDHDLFSADDIMGEAEIDLQPLITSAIAFGDAGMFDDMQIGKWLKSNDNALIEDSIVNIIDGKVKQDISIKLQNVECGEIYLELEWICLE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00920 329 Gene3D C2 domain 172 328 IPR035892 -
Car06g00920 329 CDD ArfGap 20 126 - -
Car06g00920 329 SMART arf_gap_3 18 139 IPR001164 GO:0005096
Car06g00920 329 SMART C2_3c 175 270 IPR000008 -
Car06g00920 329 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 10 328 IPR044518 GO:0005096|GO:0005543
Car06g00920 329 Gene3D Arf GTPase activating protein 6 139 IPR038508 -
Car06g00920 329 ProSiteProfiles ARF GTPase-activating proteins domain profile. 17 146 IPR001164 GO:0005096
Car06g00920 329 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 10 328 - -
Car06g00920 329 CDD C2_ArfGAP 174 317 - -
Car06g00920 329 SUPERFAMILY ArfGap/RecO-like zinc finger 17 133 IPR037278 -
Car06g00920 329 Pfam Putative GTPase activating protein for Arf 18 133 IPR001164 GO:0005096
Car06g00920 329 PRINTS HIV Rev interacting protein signature 29 48 IPR001164 GO:0005096
Car06g00920 329 PRINTS HIV Rev interacting protein signature 48 65 IPR001164 GO:0005096
Car06g00920 329 PRINTS HIV Rev interacting protein signature 69 90 IPR001164 GO:0005096
Car06g00920 329 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 170 268 IPR035892 -
Car06g00920 329 Pfam C2 domain 175 264 IPR000008 -
Car06g00920 329 ProSiteProfiles C2 domain profile. 156 271 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00920 Car-Chr6 9021175 9026823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00920 10 329 C2H2 Transcription Factor Family AT4G21160 72.340 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00920 K12486 - gmx:100777084 553.903