Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00917 ATGGCACTTTGTATGCATAGAGATTCATCAAACAAACAGCAACAAATGGATAGTAGCAAGTATGTTAGGTATACACCTGAACAAGTTGAAGCTTTGGAGAGAGTTTATGCTGAATGTCCTAAGCCAACTTCTTCCAAAAGACAACAACTCATTAGGGAGTGTCCTATACTCTCTAATATTGAACCTAAACAGATCAAAGTTTGGTTTCAGAATCGCAGATGTCGCGAAAAGCAGCGCAAGGAAGCCTCTCGTCTGCAGACAGTAAATAGAAAGCTGACTGCAATGAATAAGTTGTTAATGGAAGAGAACGACCGTCTGCAGAAGCAGGTCTCACAGTTGGTTTATGGAAATGGATTCATGAAACAACAAATTAAGACCGTAACGTCTGCAACTACTACAGACAATAGCTGTGAGTCTGTGGTAATGACTGGTCATAACCAACAGCCAATCCCAAAAACTCAGCATTCCCAATGGGATGCCAACAACCCAGCTGGTCTTCTTGCAATAGCTGAGGAGACCCTGGCAGAGTTCCTTGCCAAGGCTACTGGAACTGCTGTCAACTGGGTCCAAATTATTGGGATGAAGCCTGGTCCGGATTCTATTGGCATCGTTGCTGTTTCCCGCGATTGTAGTGGGGTAGCAGTGCGAGCCTGTGGCCTTGTGAGCCTTGAGCCCACAAAGGTTGCCGAGATTCTTAAAGATCGTCCGTCATGGTACCGTGACTGTCGATGCCTTGATGTAGTGAGCATAGTCCCCACAGGAAATGGTGGCACAATAGAGTTATTGTACATGCAGACTTATGCACCTACTACATTGGCAGCAGCACGAGACTTTTGGACGCTAAGATACACAAGAAGTTTGGAAGATGGAAGCCTTGTGATTTGTGAGAGATCCTTGACTTCGTTGACAGGTGGTCCCATAGGGCCTCCTACATTGAACTTTGTAAGAGCTGAAATGCTTTCTAGTGGCTATCTAATTAGATCCTGTGATGGTGGTGGATCTATTGTTCACATTGTTGATCATGTCGATTTAGATGTTTGTAGCGTTCCTGAAGTACTGAGGCCACTTTATGAATCATCAAAGTTCTTGGCTCAGAAAATGACTATTGCTGCCTTGCGGCATATAAAACAGATTGCACTAGAATCAAGTGGAGAAGTTAATTATGCAGGAGGGCGTCAACCTGCTGTCTTGAGGACATTTAGTCAGAGACTTAGCAAAGGGTTCAATGATGCTATCAATGGATTTGTTGACGATGGTTGGTCTTTGATCGGTAATGATGGTGTGGAAGATGTGACCATAACTATAAACTCGTCTCCCAACAAGTATTTTGGCTCTCATTACAATGCATCAATGCTCCCAGCTTTTGGAGGTGGCGTCATGTGTGCTAAGGCATCAATGCTGCTCAAGAATGTTCCTCCTGCGTTGCTTGTTCGCTTTTTGAGGGAGCATCGTTCAGAGTGGGCTGATTATGGGGTTGATGCATATTCTGCTACATGCCTTAAGGCCAGTCCTTTTGCAGTTCCCTGTGCAAGACCCGGTGGCTTCCCCAGCAGCCAAGTCATTTTACCGCTTGCACATACTCTAGAGCATGAAGAGTTCTTGGAGGTAGTTCGTATAGAGGGTCATGCGTTTTCTCCCGAAGATGTGGCCTTGGCACGCGATATGTATCTTCTGCAGCTGTGCAGTGGAGTTGATGAAAATTCGGTTGGAGCATGTGCGCAGCTTGTGTTTGCACCTATTGATGAATCATTTGCAGATGATGCTCTCTTACTTCCTTCTGGCTTCCGCATCATACCGTTGGATCCTAAAGCAGATGCTCCTGCTGCAACTAGAACATTAGATTTGGCATCAGCTCTTGAAATAGGATCCGGTAATTCCCATCAAGCCGGTGAAGGTGATCTGAATAGCTACAACATTAGGTCGGTCCTTACAATTGCATTCCAGTTTACATTCGAGAACCATTTGCGGGACAATGTGGCTGCAATGGCGCGCCAGTATGTCCGCAGTGTTGTGCGATCTGTTCAGAGGGTTGCCATGGCAATATCTCCCTCTCCGTTCACACAGTTGGGGCCGAAGTCACTTTCTGGTCCACCAGAGGCTCTTACTTTGGCACAATGGATCTATAGAAGCTACAGGATCCACACCAGCGCCGAGCTATTTAAAGTCGAGTCCATGGCTAGTGATACAATCTTGAAGCAGCTTTGGCACCATTCAGATGCAATAATGTGCTGTTCTATTAAAACAAATGCATCACCTGTTTTCACCTTTGCAAACCAAGCTGGACTTGACATGCTTGAAACAACTCTAGTTTCCCTTCAAGACATAATGCTTGATAAAGTTCTTGATGAAGCTGGCAAGAAGTTTATCTACTTCGAGTTCGCCAAGATAATGCAACAGGCTATTGCATGGAAAGTTGTGGATGATAATGACTGTAATCACTGCTTGGCCTTCATGTTTGTGAACTGGTCTTTTGTCTGA 2478 0.4508 MALCMHRDSSNKQQQMDSSKYVRYTPEQVEALERVYAECPKPTSSKRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYGNGFMKQQIKTVTSATTTDNSCESVVMTGHNQQPIPKTQHSQWDANNPAGLLAIAEETLAEFLAKATGTAVNWVQIIGMKPGPDSIGIVAVSRDCSGVAVRACGLVSLEPTKVAEILKDRPSWYRDCRCLDVVSIVPTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTRSLEDGSLVICERSLTSLTGGPIGPPTLNFVRAEMLSSGYLIRSCDGGGSIVHIVDHVDLDVCSVPEVLRPLYESSKFLAQKMTIAALRHIKQIALESSGEVNYAGGRQPAVLRTFSQRLSKGFNDAINGFVDDGWSLIGNDGVEDVTITINSSPNKYFGSHYNASMLPAFGGGVMCAKASMLLKNVPPALLVRFLREHRSEWADYGVDAYSATCLKASPFAVPCARPGGFPSSQVILPLAHTLEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGVDENSVGACAQLVFAPIDESFADDALLLPSGFRIIPLDPKADAPAATRTLDLASALEIGSGNSHQAGEGDLNSYNIRSVLTIAFQFTFENHLRDNVAAMARQYVRSVVRSVQRVAMAISPSPFTQLGPKSLSGPPEALTLAQWIYRSYRIHTSAELFKVESMASDTILKQLWHHSDAIMCCSIKTNASPVFTFANQAGLDMLETTLVSLQDIMLDKVLDEAGKKFIYFEFAKIMQQAIAWKVVDDNDCNHCLAFMFVNWSFV 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00917 825 Coils Coil 89 109 - -
Car06g00917 825 Pfam MEKHLA domain 702 799 IPR013978 -
Car06g00917 825 SUPERFAMILY Bet v1-like 416 603 - -
Car06g00917 825 Gene3D - 10 86 - -
Car06g00917 825 ProSiteProfiles START domain profile. 159 360 IPR002913 GO:0008289
Car06g00917 825 Pfam START domain 169 377 IPR002913 GO:0008289
Car06g00917 825 SMART HOX_1 17 83 IPR001356 GO:0003677
Car06g00917 825 CDD homeodomain 20 80 IPR001356 GO:0003677
Car06g00917 825 SMART START_1 168 378 IPR002913 GO:0008289
Car06g00917 825 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
Car06g00917 825 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 825 IPR044830 GO:0003700
Car06g00917 825 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 825 - -
Car06g00917 825 SUPERFAMILY Homeodomain-like 20 82 IPR009057 -
Car06g00917 825 Gene3D - 202 379 IPR023393 -
Car06g00917 825 Pfam Homeodomain 20 78 IPR001356 GO:0003677
Car06g00917 825 CDD bZIP 72 111 - -
Car06g00917 825 SUPERFAMILY Bet v1-like 169 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00917 Car-Chr6 8988957 8994240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00917 1 825 Homeobox Transcription Factor Family AT2G34710 73.419 0.0 1284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Car06g00917 START 3.1e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00917 K09338 - gmx:100779499 1409.05