Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00914 ATGGGAAATTGTTGCTATAGGTTGGAATCATCAGATTATAGAGTCTCATCCAATGCAAAATCAGAAAAAAACCAGGCAATAAAAGAAAGGCATGATGATAGCAAGTTACCATCAAATCCTAAAGAAGTTGAAGATCTTAGGCGTGATTCAGCTGCAAATCCATTGATTGCATTCACATATAAAGAGCTAAAGATAATAACTGGAAATTTTAGACCAGATCGTGTGTTAGGAGGAGGTGGATTTGGAAGTGTTTATAAAGGCTTTATTTCTGAAGAGTTAAGGGAAGGACTTCCTTCTCTTCCTGTTGCTGTTAAGGTTCATGACGGTGACAATAGCCATCAAGGTCATAGAGAATGGCTGGCAGAAGTAATATTTTTGGGGCAGCTTTCACATGCAAATTTGGTAAAATTAATTGGATATTGCTGCGAAAACGAACATAGGGTGCTAATATATGAGTATATGGCACGGGGAAGTGTGGAAAACAATTTGTTCTCAAAAATTTTGGTTCCGTTACCATGGTCTATAAGAATGAAGATTGCATATGGTGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAGATAAACCTGTCATCTATCGTGATTTTAAGACATCTAATATTTTATTGGACCTGGATTATAATGCAAAGCTTTCTGATTTTGGGCTTGCTAAAGATGGACCTGTTGGAGACAAGTCCCATGTTTCTACTAGAATCATGGGAACATATGGATATGCTGCACCTGAATACATTATGACAGGTCATCTTTCTCCAAGAAGTGATGTTTATAGTTTTGGTGTTGTTCTTCTTGAACTTTTGACTGGAAGAAAATCTTTAGACAAATTAAGACCAGCCAGAGAACAGAACCTAACAGAATGGGCTCTTCCATTGCTTAAAGAAAAGAAGAAATTGCTAAACATTATTGATCCAAGGCTAGAAGGTGATTTTCCACTCAAAGGAGTTCACAAAGCTGCAATGCTTGTATATCATTGCTTGAACAAGAATCCTAAAGCAAGACCACTTATGAGAGATATTGTTGATTCATTGGAACCTTTGACTACATACACTCAGCTCCCTATTCAAAAAACATTTACTATTATCACTGAATCTCATCATGATCAAAGTAAACATCAAAATTAA 1137 0.365 MGNCCYRLESSDYRVSSNAKSEKNQAIKERHDDSKLPSNPKEVEDLRRDSAANPLIAFTYKELKIITGNFRPDRVLGGGGFGSVYKGFISEELREGLPSLPVAVKVHDGDNSHQGHREWLAEVIFLGQLSHANLVKLIGYCCENEHRVLIYEYMARGSVENNLFSKILVPLPWSIRMKIAYGAAKGLAFLHEADKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYIMTGHLSPRSDVYSFGVVLLELLTGRKSLDKLRPAREQNLTEWALPLLKEKKKLLNIIDPRLEGDFPLKGVHKAAMLVYHCLNKNPKARPLMRDIVDSLEPLTTYTQLPIQKTFTIITESHHDQSKHQN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00914 378 MobiDBLite consensus disorder prediction 16 45 - -
Car06g00914 378 MobiDBLite consensus disorder prediction 23 45 - -
Car06g00914 378 ProSiteProfiles Protein kinase domain profile. 70 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00914 378 ProSitePatterns Protein kinases ATP-binding region signature. 76 105 IPR017441 GO:0005524
Car06g00914 378 Pfam Protein tyrosine and serine/threonine kinase 73 348 IPR001245 GO:0004672|GO:0006468
Car06g00914 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Car06g00914 378 Gene3D Transferase(Phosphotransferase) domain 1 154 369 - -
Car06g00914 378 SUPERFAMILY Protein kinase-like (PK-like) 53 371 IPR011009 -
Car06g00914 378 Gene3D Phosphorylase Kinase; domain 1 31 153 - -
Car06g00914 378 PANTHER OS01G0588500 PROTEIN-RELATED 9 361 - -
Car06g00914 378 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 9 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00914 Car-Chr6 8940917 8944536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00914 3 353 Glycoside Hydrolase AT3G07070 46.814 1.26e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car06g00914 PK_Tyr_Ser-Thr 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00914 - - gmx:100775722 651.744