Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00905 ATGGAAAACATTGCCGCGCAATTGAAGCGCGGCATCTCGCGCCAATTCTCTTCCGGCTCGTTACGAAAGACGCTGAGCCGTCAATTCACGCGTCAGGCTTCGCTCGATCCGCGCCGGAACAATCTCCGATTCAGCTTCGGCCGTCAATCATCGCTTGATCCGATCCGGAGAAGTACGAGTGAAGACCAGACTGAACTCACCGTGCCGGAGAATCTCGACTCCACCATGCAACTTCTATTTATGGCTTGCCGTGGTCATGTTGACGTCGCTAAACTCTTGCTCAGCCGTAAGGCTAACCTTGACGCTCGTGATCGTTGGGGCAGTACGGCAGCGGCTGATGCTAAATATTACGGAAATACAGAAGTGTATTATATGTTGAAGGCGCGGGGAGCAAAAGTGCCGAAAACCAAGAAGACTCCAATGACTGTTGCAAATCCTCGTGAAGTTCCTGAATATGAACTCAATCCGTTAGAACTACAGGTTCGGAAGAGTGACGGTATTTCAAAGGGGACATATCAAGTAGCTAAATGGAATGGCACAAAGGTTGCAGTGAAGATACTAGATAAGGACAGTTATTCTGATCCTGATACCATAAATGTTTTCAAACACGAGCTCACATTATTGGAAAAGGTGCGACATCCTAACGTGGTCCAGTTTGTTGGAGCTGTCACCCAAAACATACCTATGATGATTGTTCGAGAGTACCATGCTAAGGGTGACTTAGCAGGCTATCTTCAAAAGAAAGGGCGTTTGTCACCATCAAAAGTTCTACGGTTCGCTCTTGATATTGCCAGGCAATTATCTCAATTTATTGTTAGCAGGGGCTTGAATTATCTTCATGAATGCAAACCAGATCCTATTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGGCAGCTGAAGGTAGCTGGATTTGGCACTGTGAGGTTTTCGCTAATCTCACCTGACAAAGCAATGTTAGCACAGCCTGAGGCCAACGTGGACCTTTCAAGCTTGTACGTGGCACCAGAGATTTACAGAGGTGATGCATTTGATAGAAGTGTGGATGCATATTCTTTTGGTCTTATTGTATACGAGATGATAGAGGGTATACCACCCTTCCATCCCAAGTCCCCAGATGAAATTTTGAACCTGATGTGTTTAGGAGGGAAGAGACCACAATTCAAGATCAAAACAAAAAGTTATCCTCCGGATTTGAAAGAGTTAGTAATCAAAGTAAAAGTTAAGTCTTCAATTGAAGCGCGACTTTAG 1266 0.4487 MENIAAQLKRGISRQFSSGSLRKTLSRQFTRQASLDPRRNNLRFSFGRQSSLDPIRRSTSEDQTELTVPENLDSTMQLLFMACRGHVDVAKLLLSRKANLDARDRWGSTAAADAKYYGNTEVYYMLKARGAKVPKTKKTPMTVANPREVPEYELNPLELQVRKSDGISKGTYQVAKWNGTKVAVKILDKDSYSDPDTINVFKHELTLLEKVRHPNVVQFVGAVTQNIPMMIVREYHAKGDLAGYLQKKGRLSPSKVLRFALDIARQLSQFIVSRGLNYLHECKPDPIIHCDLKPKNILLDNGGQLKVAGFGTVRFSLISPDKAMLAQPEANVDLSSLYVAPEIYRGDAFDRSVDAYSFGLIVYEMIEGIPPFHPKSPDEILNLMCLGGKRPQFKIKTKSYPPDLKELVIKVKVKSSIEARL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00905 421 Gene3D - 54 155 IPR036770 -
Car06g00905 421 PIRSF ILK 82 414 - -
Car06g00905 421 PIRSF ILK 8 90 - -
Car06g00905 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Car06g00905 421 SUPERFAMILY Protein kinase-like (PK-like) 171 410 IPR011009 -
Car06g00905 421 Gene3D Phosphorylase Kinase; domain 1 156 236 - -
Car06g00905 421 SUPERFAMILY Ankyrin repeat 77 143 IPR036770 -
Car06g00905 421 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 71 408 - -
Car06g00905 421 SMART serkin_6 161 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00905 421 Pfam Protein kinase domain 174 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00905 421 ProSiteProfiles Protein kinase domain profile. 157 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00905 421 Gene3D Transferase(Phosphotransferase) domain 1 237 416 - -
Car06g00905 421 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515
Car06g00905 421 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 71 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00905 Car-Chr6 8843671 8852272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00905 1 411 MAP Kinase Kinase Kinase AT2G43850 69.420 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Car06g00905 Pkinase 4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00905 - - gmx:100810411 694.886