Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00898 ATGGATGGTCAAGGTGGTGGTGACAATCACCAAAAGTCTATTGAATGCAATAACAACAAAGAAACAGTTTTCTTACATGGTGATTTAGATCTATTGATCATAGAAGCAAAATCTCTTCCAAATTTGGATTTATCAACTGAAACAATTAGAAGATGTCTCACTATGGGAAACAGTTGCACCCCTCCTTTTGTTAAAGGACTCAAAACACACTCAGGAAAAGACAAGATCATAACAAGTGACCCTTATGTTTCTATTTGTCTAGCTGGTGCAACCATAGCTCAAACAAGAGTTATTCCAAATTGTGAAAACCCTTTATGGGATGAACACTTTATTGTTCCTGTTGCACATCCTGTTCAAAAAGTTGAGTTTCTTGTGAAAGATAATGATATTCTTGGTGCTGAACTCATTGGTGTTGTGGAAATACCTGTTCAAAAGATACTTCCTGGAAACACTATCAATGATTGGTTTCCAATTATTGGTCAATATGGGAATTGTCTAAAACCTTATCCTGAGTTGCATATTTCTATTCAATATAAGCCTATTGGAGCTAATAGCTCTTCTCAGTATTTTAGAGATGATAATGGAAATGTTAACTTAGGTGTTCCTGGAACTTATTTTCCTCTTAGGAAAGGTGGGAATATTACTTTATATCAAGATGCACATGTACCTGATGATATGCTACCTGAAATTCCACTTGATGGTGGGAAAGTTTTTCAACATAGTAAATGTTGGGAGGATATATGTCATGCAATTTTGGAAGCTCATCATTTGATATATATTGTTGGATGGTCAATTTATCATCCTGTGAAGCTTGTTAGAGAGCCAACAAAACCATTGCCTTCTGGTGGAGAGCTTTCACTTGGAGAGTTGTTGAAATACAAATCACAAGAAGGGTTAAGAGTGGTTGTGCTCATTTGGGATGACAGAACTTCACATGACAAGTTTCTTTTGAAAACAGATGGTGTCATGCAGACTCATGATGAAGAAACTAAAAAGTTTTTCAAACATTCCACTGTTCATTGTGTGTTATCTCCACGTTATGCAAGCAATAAACTCAGTATTTTCAAGCAACAGGTTGTAGGAACTCTCTTTTCACATCACCAGAAATGTGTGCTTTTAGACACTCAAGGTTCTGGGAATAATCGAAAAATAACCGCTTTTATGGGTGGTTTGGATCTCTGTGATGGAAGATATGATACACCTGAGCATAGGCTTTTTCGCGATCTTGATACTGTCTTTGAAAAAGATTATCATAATCCTACATTTCAATTAAATGCCTGTGCGCCAAGGCAACCATGGCATGATTTACATTGCAAAGTTGAAGGTCCAGCAGCATATGATATATTGACTAATTTTGAACAAAGATCAAGGAAGGCCAAAAAATGGCGTGACTTTAGGCTCAGAAAGGTGACAAACTGGCACGATGATGCTTTGTTAAGACTAGATCGTATTTCGTGGATTGTTAAACCATCTTCTGGTCCTGATGGTGATAAATCTGTTCGTGTAACCGAAGAAACCGATCCTGAGAATTGGCATGTGCAGGTATTTCGGTCCATAGATTCAGGATCAGTGAAGGGATTTCCAAAGGATTTTGACAAAGCAAAGTCTCAGAATCTTTTATGTGGAAAAAATTTAAAAGTTGACCAAAGTATTCATGCTGCTTATGTAAAAGCGATACGATCGGCTCAGCGATTCATATACATTGAGAATCAATATTTTCTTGGCTCCTCTTATCATTGGCCTTCATATAAAAATGCAGGGGCAAATCACTTGATTCCCATGGAGTTGGCTTTAAAAATCGCCAGCAAGATAAGTGCAAACGAACGTTTTTCGGTGTATATAGTTATACCAATGTGGCCAGAAGGAGTTCCAACTAGTGCTTCTGTTCAAGAAATATTGTTCTGGCAGGGACAAACAATGTCTATGATGTACAAGATTATTGCAGATGCACTTGCAAGAGCAGGTCTCTCTGAATGTTATCATCCACAAGATTATCTCAACTTTTACTGCCTCGGAAAGAGAGAACCTCAATTGCACGAAAGTGCATCACCACTACACCAATCATCCGAAAATCGTGCCTTGGCATCGGTTAAAAAATACAGGCGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATGGATATGTAATCATTGGATCAGCAAATATTAATCAGAGATCAATGGATGGCTCAAGGGACACAGAAATAGCCATGGGAGCTTATCAACCAAAATACATATTGGCAGAAAATAAGTCACTTCCACATGGCCAGGTGTACGGATACCGAATGTCGCTTTGGGCGGAGCATCTTGGTGGCATTGATGACACTTTTGGTGAACCTCACAGCTTGGAATGTGTTAGGCATGTAAACAGAATTGCAAAGAAAAATTGGAGCTTATATGTGTCTGAGGAAGGGTATCAAATGAGAGGACATTTGATGCAGTATCCAGTTCATGTTAGCAGGAATGGAAAAGTCAGTTCATTAGATGGTCATGAGTCATTTCCTGATGTTGGTGGCAAAATTCTTGGATCACATAATTCACTTCCGGATGCACTAACCACATGA 2574 0.3815 MDGQGGGDNHQKSIECNNNKETVFLHGDLDLLIIEAKSLPNLDLSTETIRRCLTMGNSCTPPFVKGLKTHSGKDKIITSDPYVSICLAGATIAQTRVIPNCENPLWDEHFIVPVAHPVQKVEFLVKDNDILGAELIGVVEIPVQKILPGNTINDWFPIIGQYGNCLKPYPELHISIQYKPIGANSSSQYFRDDNGNVNLGVPGTYFPLRKGGNITLYQDAHVPDDMLPEIPLDGGKVFQHSKCWEDICHAILEAHHLIYIVGWSIYHPVKLVREPTKPLPSGGELSLGELLKYKSQEGLRVVVLIWDDRTSHDKFLLKTDGVMQTHDEETKKFFKHSTVHCVLSPRYASNKLSIFKQQVVGTLFSHHQKCVLLDTQGSGNNRKITAFMGGLDLCDGRYDTPEHRLFRDLDTVFEKDYHNPTFQLNACAPRQPWHDLHCKVEGPAAYDILTNFEQRSRKAKKWRDFRLRKVTNWHDDALLRLDRISWIVKPSSGPDGDKSVRVTEETDPENWHVQVFRSIDSGSVKGFPKDFDKAKSQNLLCGKNLKVDQSIHAAYVKAIRSAQRFIYIENQYFLGSSYHWPSYKNAGANHLIPMELALKIASKISANERFSVYIVIPMWPEGVPTSASVQEILFWQGQTMSMMYKIIADALARAGLSECYHPQDYLNFYCLGKREPQLHESASPLHQSSENRALASVKKYRRFMIYVHAKGMIVDDGYVIIGSANINQRSMDGSRDTEIAMGAYQPKYILAENKSLPHGQVYGYRMSLWAEHLGGIDDTFGEPHSLECVRHVNRIAKKNWSLYVSEEGYQMRGHLMQYPVHVSRNGKVSSLDGHESFPDVGGKILGSHNSLPDALTT 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00898 857 Pfam PLD-like domain 621 739 IPR025202 -
Car06g00898 857 Pfam Phospholipase D C terminal 777 847 IPR024632 -
Car06g00898 857 Pfam C2 domain 27 158 IPR000008 -
Car06g00898 857 ProSiteProfiles C2 domain profile. 8 156 IPR000008 -
Car06g00898 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 362 397 IPR001736 GO:0003824
Car06g00898 857 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 25 180 IPR035892 -
Car06g00898 857 PANTHER PHOSPHOLIPASE D 19 857 IPR015679 -
Car06g00898 857 Gene3D Endonuclease Chain A 518 754 - -
Car06g00898 857 SMART pld_4 703 730 IPR001736 GO:0003824
Car06g00898 857 SMART pld_4 362 397 IPR001736 GO:0003824
Car06g00898 857 Gene3D C2 domain 23 179 IPR035892 -
Car06g00898 857 SUPERFAMILY Phospholipase D/nuclease 202 464 - -
Car06g00898 857 SMART C2_3c 28 155 IPR000008 -
Car06g00898 857 PIRSF PLD_plant 14 857 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Car06g00898 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 703 730 IPR001736 GO:0003824
Car06g00898 857 CDD C2_plant_PLD 22 178 - -
Car06g00898 857 Gene3D Endonuclease Chain A 235 477 - -
Car06g00898 857 SUPERFAMILY Phospholipase D/nuclease 549 774 - -
Car06g00898 857 PANTHER PHOSPHOLIPASE D 19 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00898 Car-Chr6 8758268 8762933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00898 11 856 Phospholipase D Gene Family (Wang group) AT2G42010 53.257 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00898 K01115 - gmx:100779740 1481.08