Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00893 ATGGAGAATTATGAGGAAGTGAAGAATATTGGGGATGGAAATTTTGCAATTGTAAAGCTTTTACGCCACAAAGAGACTAAAGCCCTCTTTGCCGTCAAATACATCTCAAGAGATCAAACGattgatgaaagggtggaaagggaaatcataaaccatagatctcttcatcatccaaatattattcagttcaaggagGTGATTTTGACTCCAACACATATTGCAATAGTTATGGAGTATGCAGCTAATGGTGATTTATTTGATTATGTTTGTAATCAGGGTAAATTAAGTGAAGATGAGGCTCGGTATTTCTTCCAACAACTCATTTCAGGGGTTAGTCATTGTCATGACATGGAAATATGTCACCGAGACTTAAAGTTTGAGAACACATTATTGGATGGAAGGCGTATTAAAATTTGTGATTTTGGCTATTCTAAGTCACGTCTACTACATTCGAGGCCCAATTCAAGGATAGGAACTCTATCCTATATTGCACCAGAGATTTTTTCTTGTAAGGAATACGATGGAAAGTTAGCAGATGTTTGGTCATGTGGAGTGATACTTTATATAATGCTAGTGGGAGAATTGCCATTTGGGGACCAAAAGGATTTGAAAAATCCCCAGAAAACCGTAAATCAAATTATGCTTGCTCAATACAAGATTCCAAACACCATTCATATATCTCAAGATTGTAGAAATCTAATATCTCGCATTTTTGTGGCAAATCCGGTGAAAAGAATCACCATGAGAGAAATTAAGTCCCACGCATGGTTTTTAAAGGACTTGCCTAAGGAATCAACAAAAGGGGGTCAAGATGTGTACTACTCTTCTCTTCAAACTATAGAAGAGATTATGAACATTCTTGATGAGGCTAAAAATCTACCAGAAACTTCTAGTAGAGATCAATTGGAGGATTTAGCTGAGGCTTTAAAGAAGATGTAA 939 0.3365 MENYEEVKNIGDGNFAIVKLLRHKETKALFAVKYISRDQTIDERVEREIINHRSLHHPNIIQFKEVILTPTHIAIVMEYAANGDLFDYVCNQGKLSEDEARYFFQQLISGVSHCHDMEICHRDLKFENTLLDGRRIKICDFGYSKSRLLHSRPNSRIGTLSYIAPEIFSCKEYDGKLADVWSCGVILYIMLVGELPFGDQKDLKNPQKTVNQIMLAQYKIPNTIHISQDCRNLISRIFVANPVKRITMREIKSHAWFLKDLPKESTKGGQDVYYSSLQTIEEIMNILDEAKNLPETSSRDQLEDLAEALKKM 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00893 312 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00893 312 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00893 312 Gene3D Transferase(Phosphotransferase) domain 1 81 264 - -
Car06g00893 312 PANTHER SERINE/THREONINE KINASE 2 297 - -
Car06g00893 312 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 297 - -
Car06g00893 312 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Car06g00893 312 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00893 312 SUPERFAMILY Protein kinase-like (PK-like) 2 264 IPR011009 -
Car06g00893 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Car06g00893 312 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00893 Car-Chr6 8701646 8704573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00893 4 260 CBL-interacting serine-threonine protein kinases AT2G26980 40.149 1.15e-61 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Car06g00893 Pkinase 2.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00893 K14498 - pop:18098269 429.869