Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00891 ATGGTTACAGATGCAACAAATTCAACAAGACATTCTATATGTCCCGTGTCTATGAATTTTGTCCACAAAGTTCCTTGGAATTCCTCCACTTGTCTTAATTTCAAACCTTTAGAATCCAAAACCAAAACAAAAGAAACCATTTGTTGTCAAACTCTATTATCTCTCTTTGGTATACCACTTTCGGAATATCTAAAAAAAACCTCACTTTTCCATTTTCAAAATATCACTACTTCAATCTCTTGCCTTCAAGATTTCCAATCTAACCTAACTTCACTTTCACTCCCAGACAACCTAGTTTCTTCTTGCTTTGATCCATCTCAATTTGTAACCACTCCTGACACTTGTGTTCATATTCAAACTGAGCAAGATTTGGTTCACTCAGTTGATCCAACGAATTTAGCACTACTTAACACTCTTTGTGAACCCGATTTAACAGATCGTAATCATTGTCCTGCTTGTGTTACACAAGGGATTAAGGTTCAACAGATTCTGACTAAAATTGATGGTAATAGTTCACATTCTCAAGATTGTTTTTTCTTCACTATACTTTATATTGCTGGAATTGTGAATAAACTTGGTCCTGAGAGTAATGGTATTTCGGCTTGCATTCTTATTTTGTTTGCTAATTTACAAGGGGATTCTAAAAAGGAACACCATCATGCTCTTGTTATAGGGTTGGTTGCAGCTTCATTTGTGTTTGTGTCTTTTTTGTTAGGGTTATTGTATTTTTGGTATAAATGGTGGGTGAAAAGAACAAATGTTGATAATTTACTGTCACATAATGCTGGTTCACAGGAACCTAGCTTTAGTTTAAGAGTTAGACCAAAAAGTGGGTTGATTTGGTTTGAATTTAAGGATCTTGTGAAGGTTACTGACAATTTTTCAGCCGAAAATTTCGTTGGAAGAGGTGGGTTTAGTTTGGTTTACAAGGGGATTTTACCCGATGGGACGATCATTGCGGTTAAAAGGATTGAAGAGTCTGATTATCTAGGAGATGCTGAGTTTTACAGTGAGGTGGGGATTGTTAGCAGTTTGAAGCACCGGAATCTGGTGCCACTAAGAGGCTGTTGTGTGGTTGGTGAGGATGAGAGTCCTGAGTACTCAGGAAAGTATCTTGTTTATGATTATATGTCGAATGGTAATCTTAAAGACCATCTTTTTCCAGACATGGAAAACCAAAATGTTAAGCAATCACTGACTTGGTCTCAAAGAAAAAACATAATCTTGGATGTGGCGAACGCGTTGATTTATTTGCACTTTGGAGTTAAACCTGCTGTTTACCACAGAGATATAAAACCTACCAATATACTACTTGATGCAGGTATGAGGGCAAGAGTTGCAGATTTCGGTCTGGCCAAACAGGACATTCAAAATAAGCCTCAAATAAATactagagtagccggaactcgtggatatttagctccggaatatgcactttatggtcagttaactgagaagagtgatgtctatagctttggcgtcgttgttcttgagataatgtgtggaagaaaAGCTCTTCAGTTGTCTTCGTCCGGAGAGCCTAATTTCTTGATCATAGATTGGGTTTGGTCGTTAATGAAATCTGGAAAAATAGAGAAGGCTTTCGATGTTTCTATCTTAATGGATGGAAATTCCAATAGAAGCATAATGGAGAGATTTTTGCTGGTTGGAATTCTGTGTTCTCATGCTGTGGCTGATTCAAGGCCAACAATTTTGGATGCTTTGAAAATGTTAGAAGGAGACATTGAGGTTCCACCAATTCCAGATTGGCCAATCACTCTAGGGAAACGCATGTTTACCAAAGAAACCTCAAGTAGTTCATTTTGA 1827 0.3476 MVTDATNSTRHSICPVSMNFVHKVPWNSSTCLNFKPLESKTKTKETICCQTLLSLFGIPLSEYLKKTSLFHFQNITTSISCLQDFQSNLTSLSLPDNLVSSCFDPSQFVTTPDTCVHIQTEQDLVHSVDPTNLALLNTLCEPDLTDRNHCPACVTQGIKVQQILTKIDGNSSHSQDCFFFTILYIAGIVNKLGPESNGISACILILFANLQGDSKKEHHHALVIGLVAASFVFVSFLLGLLYFWYKWWVKRTNVDNLLSHNAGSQEPSFSLRVRPKSGLIWFEFKDLVKVTDNFSAENFVGRGGFSLVYKGILPDGTIIAVKRIEESDYLGDAEFYSEVGIVSSLKHRNLVPLRGCCVVGEDESPEYSGKYLVYDYMSNGNLKDHLFPDMENQNVKQSLTWSQRKNIILDVANALIYLHFGVKPAVYHRDIKPTNILLDAGMRARVADFGLAKQDIQNKPQINTRVAGTRGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALQLSSSGEPNFLIIDWVWSLMKSGKIEKAFDVSILMDGNSNRSIMERFLLVGILCSHAVADSRPTILDALKMLEGDIEVPPIPDWPITLGKRMFTKETSSSSF 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00891 608 SUPERFAMILY Protein kinase-like (PK-like) 271 579 IPR011009 -
Car06g00891 608 Pfam SPARK 11 178 IPR043891 -
Car06g00891 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Car06g00891 608 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 597 - -
Car06g00891 608 Gene3D Phosphorylase Kinase; domain 1 259 376 - -
Car06g00891 608 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Car06g00891 608 SMART serkin_6 294 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00891 608 Pfam Protein kinase domain 297 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00891 608 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 9 597 - -
Car06g00891 608 Gene3D Transferase(Phosphotransferase) domain 1 377 584 - -
Car06g00891 608 ProSiteProfiles Protein kinase domain profile. 294 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00891 Car-Chr6 8692701 8696290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00891 3 594 Receptor kinase-like Gene Family AT1G11050 54.591 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Car06g00891 Pkinase 3.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00891 - - mtr:MTR_8g088760 891.338