Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00890 ATGAAGTCCATTTTTGTGATTCTCATGATCTTTGTTATGTCTACAAATCCAACTTCAGCAGCACCTTCTCCCTCTACCAACAATTATGTTTGTCCTATTGACATGAATTATGTGTTAACAGTTCCTTGGAACACCTCAACATGCCTTAACTTCCAAGAAACCTTACAATCCCAAAACAAAACACAAACAAACCTATGTTGTCAAACTTTGTTGTCCCTTTTTGGAATAGCACTAGCAAAAAATCTAAAAAAAAACTCTCTTTTCCAACTCCCTAACCTATCTACATCCACTTCATGCCTTCAAGATTTTCAAACCAAGCTCACTTCCCTTTCACTTCACAGTGACATTGTGTCTTCATGCTTTGAACCACTTCAATTTGTGATCACTCCAAATATTTGTGCTAATATTCAATCTAAGCAAGATTGGTTCAACAAGGTTGGTCCTGCACCATTGTTCAACACTTCTTGTAAACCAGACCTTAGTGTTTCTACCAATTGTGATGCATGTGTTGATCAAGGACTCAAGGTTCAAGAGAAGCTGAATAAAATTGATGGTAATAGTTCACATTCTAAAGATTGTTTTTACTTCACTATACTTTATATTGCTGGTGTTGTGAATGAGTTTGGACCTGAAAACAGTGGTGTTATGTCATGCATTCTTGAATTGCCCCTTAACTCTCAAAAGGGTTCTAGGAAAAAGAGCCATCATCATACTCTTGTTTTTGGGTTAGTTGGTGCTTCAGTTGGATTCATTGTTATCATGTTTTCTTTGTTTGGCTTCTATTTTTGGTGGGTAAAGAGAAACAAAATTGAAAATTTTATAGACCATGTTGATCCATGGGGAGAAAAAAGGTCAAACCCAAGATTGAGACCAAACACAGGATCAATTTGGTTAAAATTTGATGACCTTGTGAAAGCCACAAACAATTTTTCACCTCAAAACTTCATTGGTAGAGGTGGATTTGGGACTGTTTACAAGGGAATTCTACATGATGACACAACAGTTGCTGTTAAAAGGATTGAAGAATCTGATTTTCAAGGAGATGATGAATTCTACAATGAAGTGGAGATTATTAGCAACTTGAAGCACCGGAATCTAGTGCCGCTAAAAGGGTGTTGTGTGGTCGATGATGATGAGGATCATAATCATGAATACAGAACAAGGTATCTTGTTCATGAATATATGCCAAATGGTAGCCTTAAAGACCATCTTTTTCCACATGAAATGGAAAAGAAATTGTTGACTTGGGTTCAAAGAAAAAGCATAATCTTGGATGTGGCAAATGGGTTGGTTTATTTGCACTATGGAGTTAAACCTGCAATTTATCACAGAGATATTAAAGCTACAAATATACTACTTGATGAAGATATGAGGGCAAGAGTTGCAGATTTTGGGCTAGCAAAACAAAGCAGTGAAAGTAAGTCTCAGCTGAATactagagtagctgggacttatggatatcttgcaccagaatatgcactttatggacagttaactgagaagagtgatgtttatagttttggtgtagttgttttggagatTATGTGTGGAAGAAAAGCACTTGAGTTGTCTTCATCAGGAACAACTAGTTTCTTGATCACAGATTGGGTTTGGTCTTTGATGAAATGTGGAAACATAGGAGAAGCTTTGGATGGTTGTATGTTGGTGGATAATGGAAAATCATATAATATAATGGAGAGGTTTTTGGTGGTTGGAATTTTGTGTTCTCATTTAGTGGCTGATTCAAGGCCAACAATTTTGGATGCTTTGAAGATGTTAGAAGGGGACATTGAAGTTCCACCAATTCCAGATAGGTTACTGAGTCTTGGAAACTACATGTTTACTAATGGTGATTCAGCAGAATAG 1866 0.3451 MKSIFVILMIFVMSTNPTSAAPSPSTNNYVCPIDMNYVLTVPWNTSTCLNFQETLQSQNKTQTNLCCQTLLSLFGIALAKNLKKNSLFQLPNLSTSTSCLQDFQTKLTSLSLHSDIVSSCFEPLQFVITPNICANIQSKQDWFNKVGPAPLFNTSCKPDLSVSTNCDACVDQGLKVQEKLNKIDGNSSHSKDCFYFTILYIAGVVNEFGPENSGVMSCILELPLNSQKGSRKKSHHHTLVFGLVGASVGFIVIMFSLFGFYFWWVKRNKIENFIDHVDPWGEKRSNPRLRPNTGSIWLKFDDLVKATNNFSPQNFIGRGGFGTVYKGILHDDTTVAVKRIEESDFQGDDEFYNEVEIISNLKHRNLVPLKGCCVVDDDEDHNHEYRTRYLVHEYMPNGSLKDHLFPHEMEKKLLTWVQRKSIILDVANGLVYLHYGVKPAIYHRDIKATNILLDEDMRARVADFGLAKQSSESKSQLNTRVAGTYGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALELSSSGTTSFLITDWVWSLMKCGNIGEALDGCMLVDNGKSYNIMERFLVVGILCSHLVADSRPTILDALKMLEGDIEVPPIPDRLLSLGNYMFTNGDSAE 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00890 621 Pfam Protein kinase domain 313 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00890 621 Gene3D Phosphorylase Kinase; domain 1 282 394 - -
Car06g00890 621 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Car06g00890 621 CDD STKc_IRAK 316 595 - -
Car06g00890 621 SUPERFAMILY Protein kinase-like (PK-like) 290 594 IPR011009 -
Car06g00890 621 ProSiteProfiles Protein kinase domain profile. 310 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00890 621 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 606 - -
Car06g00890 621 Pfam SPARK 28 194 IPR043891 -
Car06g00890 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Car06g00890 621 SMART serkin_6 310 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00890 621 Gene3D Transferase(Phosphotransferase) domain 1 395 599 - -
Car06g00890 621 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 11 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00890 Car-Chr6 8687831 8689696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00890 21 611 Receptor kinase-like Gene Family AT1G11050 58.794 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Car06g00890 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00890 - - gmx:100788367 841.262