Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00863 ATGTTAGACAGTGGTGCACGTGATTCTGAGTTGAGTTTAGAAACAGTGAATTCATCAACACAGAGAAGCTCAATGAGCAGTGAAAGCATTTGCAGCACCAGTTTTAGCCGTCTTTCATTCGACCTCCTCCCTGCCTCGCCGGAGAGTCTCTCCATTAAGCCTCACCGCTCCTCCGACTACGCCTACTCTGCTATCCGATCCGCTACCTTCCGCCGCAAGTCCGCCCTCACCTTCCGTGACTTCAACCTCATCCGCCGTATAGGCGCCGGTGACATCGGAACCGTTTACCTCTGCCGTCTCCGAAACGGAAACGAACAATTCGAAAGCGAAGAGGAAGACGCGTTGTACGCTATGAAGGTGGTGGACAAAGACGCCGTGGCATTGAAGAAGAAAACGCAGAGAGCTGAAATGGagagaaagatcctcaaaatgattgatcatccttttctccctacactctacgctgagttcgaagcttctcatttctcttgcATTGTCATGGAGTTTTGTTCCGGTGGAGACATACATTCCCTACGCCACAAACACCCTCATAACCGTCTTCCTCTTTCTCACGCTAGATTTTATGCGGCTGAAGTATTGGTGGCGTTGGAGTACCTTCACATGTTGGGAATCATTTACAGAGATCTAAAGCCCGAGAACGTGTTGGTTAGATCAGACGGTCATATCATGCTCTCTGATTTTGATCTTTCGCTTTGTTCAGATGCAATCCCTGCCGTTGAATCATCTGATTGTTTACAAGATTCCGCGTTTCAATCAGCATTACCCTACACTCGCTCGCGTTCTTTTCCTACTCCATTCACTTGCTTTTCGAACCGGTTTTTCCGGTCACGTAAGGTTCAAACCATTCAACCGAACCGGCTCTTTGTGGCTGAACCGGTTTCAGCCCGATCATGCTCATTTGTTGGAACACACGAGTACGTCTCGCCGGAAGTTGCCGCCGGAAACTCGCACGGAAACGCCGTAGACTGGTGGTCCTTCGGGATATTCATCTACGAGCTCATCTATGGGCGTACACCGTTTGCGGCTCCATCGAACAAGGATACACTGCGCAACATCCTAAAGAATCCCTTGAGTTTTCCTACGGCTACGCCGTCGAGCACGCTTGAACTCCACGCGCGGGACTTGATTTCTGGTTTGCTGAATAAAGATCCGGCTCAGCGGCTCGGGTCGAAGCGCGGCGCAGCTGACGTCAAGAAGCACCCGTTTTTCAAAGGGATAAATTTGGCGCTGATTCGTATGCTGACGCCGCCTGAAGTGCCTGGCTCGAGAAGACCTAAAACGACGTCGTTATACCGTGGGAAGGGTAGCAACGGCAATGATAGTAAACGGCAGCCAACGGCGTCGTTTGATATTTTCTTTTGA 1383 0.4772 MLDSGARDSELSLETVNSSTQRSSMSSESICSTSFSRLSFDLLPASPESLSIKPHRSSDYAYSAIRSATFRRKSALTFRDFNLIRRIGAGDIGTVYLCRLRNGNEQFESEEEDALYAMKVVDKDAVALKKKTQRAEMERKILKMIDHPFLPTLYAEFEASHFSCIVMEFCSGGDIHSLRHKHPHNRLPLSHARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDCLQDSAFQSALPYTRSRSFPTPFTCFSNRFFRSRKVQTIQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGNSHGNAVDWWSFGIFIYELIYGRTPFAAPSNKDTLRNILKNPLSFPTATPSSTLELHARDLISGLLNKDPAQRLGSKRGAADVKKHPFFKGINLALIRMLTPPEVPGSRRPKTTSLYRGKGSNGNDSKRQPTASFDIFF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00863 460 Gene3D Phosphorylase Kinase; domain 1 79 169 - -
Car06g00863 460 SMART serkin_6 81 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00863 460 ProSiteProfiles Protein kinase domain profile. 81 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00863 460 Gene3D Transferase(Phosphotransferase) domain 1 170 237 - -
Car06g00863 460 CDD STKc_phototropin_like 79 427 - -
Car06g00863 460 MobiDBLite consensus disorder prediction 1 20 - -
Car06g00863 460 MobiDBLite consensus disorder prediction 436 453 - -
Car06g00863 460 MobiDBLite consensus disorder prediction 424 460 - -
Car06g00863 460 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 460 - -
Car06g00863 460 PANTHER FLIPPASE KINASE 1-RELATED 1 460 - -
Car06g00863 460 Pfam Protein kinase domain 304 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00863 460 Pfam Protein kinase domain 82 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00863 460 Gene3D Transferase(Phosphotransferase) domain 1 303 428 - -
Car06g00863 460 SUPERFAMILY Protein kinase-like (PK-like) 60 427 IPR011009 -
Car06g00863 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00863 Car-Chr6 8452182 8453931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00863 8 459 AGC Kinase Gene Family AT2G34650 65.076 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car06g00863 Pkinase 6.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00863 - - vun:114177159 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00863 06 8452182 8453931 Car06g00863 06 8452182 8453931 ECH