Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00842 ATGGGAGTCTTCACATTCGTCCTCAACAAAACTGGCGCCGAATGGTCCGCCAAGCAATACTCCGGCGACATCGAAGCCTCCGCTGCCTCTACTTTCGAGATCCAACGGAAGCTCGTTAATGCCGCTCTCGCCGTTGATTCTTCTGGTGGTGTTCAATCCTCTTTCTCTCCTATTTCTCCTTCATCTGCTGTCTTCCAGGTGATTGTGGGTGGTGCAGTATTTGTTGGAGGtggtgctgctgctgcagctgcccctgcaggaggtgctgcccctgctgccgatgccgcccctgccgccgcAAagaaagaagaaaaggttgaggaagaggaggaggatgatgaTATGGGATTCTCACTCTTCGATTAG 366 0.3525 MGVFTFVLNKTGAEWSAKQYSGDIEASAASTFEIQRKLVNAALAVDSSGGVQSSFSPISPSSAVFQVIVGGAVFVGGGAAAAAAPAGGAAPAADAAPAAAKKEEKVEEEEEDDDMGFSLFD 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00842 121 Hamap 50S ribosomal protein L12 [rpl12]. 1 121 IPR027534 GO:0003735|GO:0005840|GO:0006414
Car06g00842 121 MobiDBLite consensus disorder prediction 84 121 - -
Car06g00842 121 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 121 IPR044252 GO:0003735|GO:0005840
Car06g00842 121 MobiDBLite consensus disorder prediction 106 121 - -
Car06g00842 121 Pfam 60s Acidic ribosomal protein 73 120 - -
Car06g00842 121 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 121 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00842 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 68.116 1.25e-28 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00842 K02942 - gmx:100527385 121.324