Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00841 ATGTCGAAACCCTGGGGTAACATCGGCGCTTGGGCCGCCGATTCCGAGCGCGCCGAAGCCGAGGAACGTGAAGCCGCTGCAGAAGCAGCAGCCGCTGGTTCAGACAATTTCCCCAGTCTCAAAGAAGCTGTTACCACCAAGCCGAAGAAGAATAAGAAAATGTCGCTTTCTGAGTTCGCCAGAGGCGGTTACGTTGGTGGTACCGCTGATTATCCACGTTTGACGCCGGATGAGATGCTTCGTCTCCCTACCGGTCCTAAGGAACGTTCCGCCGACGAAATGCAGTTTAATCGTCTCGGCGGTGGATTTTCATCTTTTGACCGTTCAGGTCGCTCGAGGGATCGAGATGGAGGCTCTGGTGATGCTTCGTGGGGAGCGGGAAGGAAATCCTACGGTGGATTTGACGAGGAACGTAGGGCTCCTAATTCTAGGGTTTCGGAATTCGATCAACCGTCTAGGGCTGACGAGGTGGATAATTGGGCTTCGGTTAAGAAATCGCTTCCTTCGTTTGATTCCGGCAGGCAGAATCGATACAGCggtggtggtggtggtggtggcggttttggcggAGAGTCTAAGGCCGATGGAGTGGACAATTGGGCGGCTGGTAAGAAACCTATTCCTGCTAGATCTTCTGATTATCGACATTCTGGAATGAATCCAGATAGCTGGTCGAGGGGTTCACGTGTGGAACCAGATCGGTGGTCTAGAGGAGCACCGGTTGAAACAGAGCAGCAGCGACCAAGGTTGGTTTTGGATCCACGGAAAGGAGATGGTTCTGTGAATGAATCTCCGGTGAAGACAAATAAGCCAAATCCATTTGGTGCGGCGAGGCCTAGGGAGGAAGTGTTGGCTGAGAAAGGATATGATTGGAAGAAGCTTGATTCTGAGATTGAGGCGAAAAAGACAAGTAGACCTACGAGTTCGCATTCTAGCAGGCCTTCAAGTGCTCAGTCTAATCGCTCGGATGGTCCAGAGGCTGTGCCGAAACCGAGGCCAAAGGTGAACCCTTTTGGGGATGCCAAACCAAGGGAGGTTTTGCTTAGTGAGCGTGGCAAGGATTGGAGGAAGATTGATCTTGAATTGGAGCATCGCGGGGTTGATAGGCCTGAGACGGAGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGAATGAACTTGAGAAGCAGTCTACAATAAATTCAAATAAGGAATCCGTCGACGACGCTGGTGGAGACCAAACTGGTACACGTGCAATGCTACTAGAGAAAGAAAGGGAGCTGGAACTTCTTACCCGTGATTTGGATGACAAAGTTCGTTTTGGGCAGAAAGCCGTTGAAAGGCCTGGTTCGTCGGCTGGAAAGACTACTGGCTTTTCTGATAGGCCACCATCTCGATCTAGCTCTTTTGAGGATTCTAGAAGTGTGGATTTTCAAGACAGACCTCGATCCCGTGGCACAGGAGATATGTCGATGCGTCCTAGTGATGACAGAAGACAATTTCAAGGTAGCAAGGAAAGGGGGTGGTTTTCAAACAACAGAGACTTGAATAGGTCAAGGTCCAGAGAGAGATGGTGA 1563 0.4882 MSKPWGNIGAWAADSERAEAEEREAAAEAAAAGSDNFPSLKEAVTTKPKKNKKMSLSEFARGGYVGGTADYPRLTPDEMLRLPTGPKERSADEMQFNRLGGGFSSFDRSGRSRDRDGGSGDASWGAGRKSYGGFDEERRAPNSRVSEFDQPSRADEVDNWASVKKSLPSFDSGRQNRYSGGGGGGGGFGGESKADGVDNWAAGKKPIPARSSDYRHSGMNPDSWSRGSRVEPDRWSRGAPVETEQQRPRLVLDPRKGDGSVNESPVKTNKPNPFGAARPREEVLAEKGYDWKKLDSEIEAKKTSRPTSSHSSRPSSAQSNRSDGPEAVPKPRPKVNPFGDAKPREVLLSERGKDWRKIDLELEHRGVDRPETEEEKLLKEEIDNLKNELEKQSTINSNKESVDDAGGDQTGTRAMLLEKERELELLTRDLDDKVRFGQKAVERPGSSAGKTTGFSDRPPSRSSSFEDSRSVDFQDRPRSRGTGDMSMRPSDDRRQFQGSKERGWFSNNRDLNRSRSRERW 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00841 520 MobiDBLite consensus disorder prediction 1 355 - -
Car06g00841 520 MobiDBLite consensus disorder prediction 433 520 - -
Car06g00841 520 MobiDBLite consensus disorder prediction 389 415 - -
Car06g00841 520 MobiDBLite consensus disorder prediction 389 405 - -
Car06g00841 520 Pfam Plant specific eukaryotic initiation factor 4B 1 503 IPR010433 GO:0003743
Car06g00841 520 MobiDBLite consensus disorder prediction 506 520 - -
Car06g00841 520 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 520 IPR010433 GO:0003743
Car06g00841 520 MobiDBLite consensus disorder prediction 468 499 - -
Car06g00841 520 MobiDBLite consensus disorder prediction 307 323 - -
Car06g00841 520 MobiDBLite consensus disorder prediction 131 160 - -
Car06g00841 520 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 520 - -
Car06g00841 520 MobiDBLite consensus disorder prediction 280 306 - -
Car06g00841 520 Coils Coil 372 402 - -
Car06g00841 520 MobiDBLite consensus disorder prediction 448 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00841 Car-Chr6 8266277 8271298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00841 1 520 Eukaryotic Initiation Factors Gene Family AT3G26400 52.952 1.10e-147 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00841 - - gmx:100784238 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00841 06 8266277 8271298 Car06g00841 06 8266277 8271298 ECH