Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00834 ATGCAATACTTCTCATTTTTTCAATTCTTTACCTTCCATTCAATATTTTCAACATGTTTATGTATCCATCTCTTCCTCTCCCATTATTTCAATGCTCCTATGGGAATTGCCAAAGTTTTCACCCTTTTCTCTAATAATAACAACCATTATTATACTCTTCCTCTTTCCACCACCATTAACCAAACTCTTGTAAACAAACCCAATACACATAAAGATCCATTTCTCTATTCAGTCTTTCAATTTTTCCGACGCCTCATCTATGGAAGGAAAATTGATGGAGGCACAAGAACAGAGGAAGAAGAGAAAGTATACTCTTGGTTATACACATTGGCTCAGTCTGAGAAAAACTTGGTCTTTGAGTATGTTAGGTCAACTGAAAGAGGCTTAAGTTTTACTGAAGCTGAGAGGAGGCTGCAAGACAACGGCCCAAATGTTCCACTCGAGTATTCTTTTCCAAGCTGGTGGCATCTTCTATGGAATGCTCTTTTCCATCCATTCAATATGATTCTGATTCTTTTATCTTCTATGTCATTCATTGCTCTCGACTATCCAAATGGATTTATCATGCTCGTATTGGTTTTTGTCAGTGTCATCCTCCGTTTCTGTCTGGAACACAAAAGCTCAAAAGCAGCGATGAAGCTTTCGGAATTTTTAAGATGTCCTATAAAAGTTCAAAGATGTGCTGGTAGATTTGAGCAGAAAGAATTAATAGTTCGAGTTGATCACAAGGATGTAGTTCCAGGCGACATTGTGATTTTTGAACCTGGGGACCTCTTTCCGGGAGATGTCAGGCTCTTATCTTCAAAACACCTTGTTGTAAGCCAGGCCTCACTAACTGGGGAATCATGGACAGCCGACAAAACTTCCGATGTTAGAGAAGATCACAACACTCCTTTACTAGATTTAAAGAACATTTGCTTTATGGGCACAAATGTGGTATCAGGCATTGGAACAGGGTTGGTTATTTCAACTGGATCCAATACTTACATGAGCACCATGTTTTCGAAAGTCGGGAAGAAGAAGCCACCAGATGACTTTGAAAAGGGTCTCAGATGGATATTTTACTTGCTTATTTCGGTTATGCTAGTAGTTGTTTCAATTATATTTGTGATAGATTACACTACATCGCTTAATTTGAGCAGGAGTAGTCTCTTCGCCATCTCAGTTGCATCTGCCCTCAATCCACAGATGCTTCCCCTCATCATTAACACATCCCTCGCGAAAGGAGCACTTGCTATGGCTAAAGACCGATGTATAGTCAAAAGGTTAACAGCTATACGTGAGATGGGGTCAATGGATATTCTTTGTATTGATAAGACAGGAACCCTTACAATGAATCATGCAATATTGGTTAATCACCTTGACTGCAGAGGTTTACCCCAAGAAAAAGTTCTACGCTATGCATTCCTCAATTCATACTTCAAGACTGAGCAAAATTATCCTCTGGATGATGCAATTCTGGCACATGTATATGCAAATGGATTCAAATTTCAGCCATCCAAGTGGAAGAAGATAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTTTCTGTTATATTAGAAACTGAAGACAGACACACGCAGTTCTTTGGCAGGTTCATGGTAACAAAAGGAGCATTGTTGGAAGTCATGAAAGTTTGTTCTTTTATTGAGAATTTCGATAAACACGAAATTTCTACCTTCTCCTCAGATGACTATCAGAGGATTTTAAATCTATCAGAAGAATTGAGCAATGAAGGGTTAAGGGTTATGGCAGTAGCTATAAAGAAGCTGCACATATCTACAACTTCACCTTTTCAAAATTTATCCGTGACATTGCAGCAGCAAACTTGCGAAACAAGTAACGGAAGCAAGAGACGCAACGATGATTTCGAAAGAGACATGATATTCCTTGGCCTCATAACATTTTTCGATCCACCGAAGGACTCAGCAAAGCAAGCACTATGGTGTTTGGCTGAGAAGGGAGTGAAAGCAAAAGTTTTAACAGGTGACTCACTTTCCTTAACCACAAGGGTATGCAGAGAAGTTGGCATAAAAACCACTCATGTTATAACAGGACCTGAGCTAGAAGAACTTGATCAAGACACATTCCACGAGACTGTTAAAAGAGCGACCGTGCTAGCTCGTCTCACCCCGACTCAGAAACTCCGAGTAGTGCAATCGTTGCAGACAATAGGAAACCATGTTGTTGGTTTCTTAGGAGATGGTGTGAATGATTCACTAGCTTTAGATGCTGCTCATGTAAGCATTTCTGTGGATTCAGGGGTAGCCATTGCCAAAGACATGGCAGATATAATCTTACTAGAGAAAGATCTCAACGTGCTCGTCGCGGGAGTGGAACACGGCCGTCTCACGTTTGGCAACACAATGAAGTATGTAAAAATGTCAGTCATTGCCAACTTAGGAAGTGTCATTTCACTCCTCATAGCAACATTGTTCTTTAAATATGAGCCTTTGACTTCGCGACAACTTCTTACGCAGAATTTCATCTACAGTTTAGGACAGATCGTCATCCCTTGGGACAAAATCGACGAAGAATATTTGAAAACTCCTCATAAGTGGTCAGAGAGAGGCTTACCGATGTTCATATTGTGGAATGGACCGGTATGCACTCTCTGTGATGTGGCAACACTTTTGTTTCTTTGGTTTTATTACAAGACTTATGCTTACGTGGATGAGAAGTTTTTTCATTCAGCTTGGTTTGTTGAGGGTCTTCTCATGCAGACACTTATTGTTCATTTGATGAGGACTGAGAAAATACCTTTCATTCAGGATATTGCTTCTTGGCCTGTGACTTTCTCTACTATTGTGATATCTGGAATTGGAATTGCAATTCCATTTACTCCTATTGGGAAGGTTATGGGATTCACCCTTCTACCTCTATCATATTTTGGATTTTTGGTTGTTATTTTTCTTGGATATTTTACAATTGGCCAAGTAGTTAAGAAACTTTATATATCGGTTTATAAGAGATGGCTTTGA 2985 0.3953 MQYFSFFQFFTFHSIFSTCLCIHLFLSHYFNAPMGIAKVFTLFSNNNNHYYTLPLSTTINQTLVNKPNTHKDPFLYSVFQFFRRLIYGRKIDGGTRTEEEEKVYSWLYTLAQSEKNLVFEYVRSTERGLSFTEAERRLQDNGPNVPLEYSFPSWWHLLWNALFHPFNMILILLSSMSFIALDYPNGFIMLVLVFVSVILRFCLEHKSSKAAMKLSEFLRCPIKVQRCAGRFEQKELIVRVDHKDVVPGDIVIFEPGDLFPGDVRLLSSKHLVVSQASLTGESWTADKTSDVREDHNTPLLDLKNICFMGTNVVSGIGTGLVISTGSNTYMSTMFSKVGKKKPPDDFEKGLRWIFYLLISVMLVVVSIIFVIDYTTSLNLSRSSLFAISVASALNPQMLPLIINTSLAKGALAMAKDRCIVKRLTAIREMGSMDILCIDKTGTLTMNHAILVNHLDCRGLPQEKVLRYAFLNSYFKTEQNYPLDDAILAHVYANGFKFQPSKWKKIDEIPFDFIRRRVSVILETEDRHTQFFGRFMVTKGALLEVMKVCSFIENFDKHEISTFSSDDYQRILNLSEELSNEGLRVMAVAIKKLHISTTSPFQNLSVTLQQQTCETSNGSKRRNDDFERDMIFLGLITFFDPPKDSAKQALWCLAEKGVKAKVLTGDSLSLTTRVCREVGIKTTHVITGPELEELDQDTFHETVKRATVLARLTPTQKLRVVQSLQTIGNHVVGFLGDGVNDSLALDAAHVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYVKMSVIANLGSVISLLIATLFFKYEPLTSRQLLTQNFIYSLGQIVIPWDKIDEEYLKTPHKWSERGLPMFILWNGPVCTLCDVATLLFLWFYYKTYAYVDEKFFHSAWFVEGLLMQTLIVHLMRTEKIPFIQDIASWPVTFSTIVISGIGIAIPFTPIGKVMGFTLLPLSYFGFLVVIFLGYFTIGQVVKKLYISVYKRWL 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00834 994 Pfam haloacid dehalogenase-like hydrolase 432 747 - -
Car06g00834 994 Gene3D - 448 638 IPR023299 GO:0000166
Car06g00834 994 PANTHER CATION TRANSPORTING ATPASE 87 993 - -
Car06g00834 994 SUPERFAMILY HAD-like 625 782 IPR036412 -
Car06g00834 994 SUPERFAMILY Calcium ATPase, transmembrane domain M 124 991 IPR023298 -
Car06g00834 994 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 429 641 IPR023299 GO:0000166
Car06g00834 994 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 87 993 - -
Car06g00834 994 SUPERFAMILY Calcium ATPase, transduction domain A 235 335 IPR008250 -
Car06g00834 994 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 699 813 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car06g00834 994 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 190 479 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car06g00834 994 Gene3D - 183 945 - -
Car06g00834 994 Gene3D - 433 771 IPR023214 -
Car06g00834 994 SFLD p-type atpase 418 784 IPR044492 -
Car06g00834 994 ProSitePatterns E1-E2 ATPases phosphorylation site. 438 444 IPR018303 -
Car06g00834 994 SMART Cation_ATPase_N_a_2 109 182 IPR004014 -
Car06g00834 994 Pfam Cation transporter/ATPase, N-terminus 120 174 IPR004014 -
Car06g00834 994 Gene3D - 220 324 - -
Car06g00834 994 PRINTS Magnesium-transporting ATPase signature 349 365 IPR006415 GO:0015444|GO:0015693|GO:0016021
Car06g00834 994 PRINTS Magnesium-transporting ATPase signature 470 483 IPR006415 GO:0015444|GO:0015693|GO:0016021
Car06g00834 994 PRINTS Magnesium-transporting ATPase signature 792 807 IPR006415 GO:0015444|GO:0015693|GO:0016021
Car06g00834 994 PRINTS Magnesium-transporting ATPase signature 810 821 IPR006415 GO:0015444|GO:0015693|GO:0016021
Car06g00834 994 PRINTS Magnesium-transporting ATPase signature 842 855 IPR006415 GO:0015444|GO:0015693|GO:0016021
Car06g00834 994 PRINTS Magnesium-transporting ATPase signature 862 878 IPR006415 GO:0015444|GO:0015693|GO:0016021
Car06g00834 994 PRINTS Magnesium-transporting ATPase signature 897 918 IPR006415 GO:0015444|GO:0015693|GO:0016021
Car06g00834 994 PRINTS Magnesium-transporting ATPase signature 947 968 IPR006415 GO:0015444|GO:0015693|GO:0016021
Car06g00834 994 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 101 993 IPR006415 GO:0015444|GO:0015693|GO:0016021
Car06g00834 994 Pfam E1-E2 ATPase 237 415 - -
Car06g00834 994 SFLD Haloacid Dehalogenase 418 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00834 Car-Chr6 8208542 8214319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00834 127 886 Primary Pumps ATPases(2) AT1G10130 26.097 8.24e-61 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00834 K01531 - gmx:100795153 1579.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00834 06 8208542 8214319 Car06g00834 06 8208542 8214319 ECH