Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00832 ATGAAAGATGAATATCACCCTCAATATAGTGCATCGTGCAGCTATAATAAAGAAACTATAAGCCCTCAATATAAAAGAATTAGATTATCTAAATCTGTTGCACTGTGCAACTATAGTGAGGAATTCATCCACTCTTCAAATAAAGCAATTGGATCATCTAACGTTGTTACAGATGATAATAGGGTATTTGTACACCCTCTAGATAGCAACAACAATGTTACTATAGAAAATGAATATCACCCTCCAGATATACCATCAATTCAAGGCCTATCAATCGATAATATTATTGGATGTAGTAAGCCTTTTGAGAAGAACCTTCAAATAAGTGATTTGGAAAAGCGGCAAAATAGATTGTTTTTGAGCAAAAAACATTCAGAAACATATTTTTTGCCTTTGTTGAGAGAAGGTGAAGACGCTAAAAAAGGAATAGATGTCATTGTCTACGATATGCAAGGTACTACGTTCTCTATGACATTTAAGATTTGGGCTGGAAAATATTATGTTCTCATGGGAGGGTGGAAAAATTTCTTTGAAGCACATGAATTGCAAGCAGTTACAGATTGTATCACGGTGTGGATGTTTCGTCATTTTGAAACCAATAATTTGTGTTTTGCTCTTAGTGTGAGAAGATTATCCATCAAAAATGAGAAATCTCTTTAG 660 0.3379 MKDEYHPQYSASCSYNKETISPQYKRIRLSKSVALCNYSEEFIHSSNKAIGSSNVVTDDNRVFVHPLDSNNNVTIENEYHPPDIPSIQGLSIDNIIGCSKPFEKNLQISDLEKRQNRLFLSKKHSETYFLPLLREGEDAKKGIDVIVYDMQGTTFSMTFKIWAGKYYVLMGGWKNFFEAHELQAVTDCITVWMFRHFETNNLCFALSVRRLSIKNEKSL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00832 219 CDD B3_DNA 102 210 IPR003340 GO:0003677
Car06g00832 219 Pfam B3 DNA binding domain 102 190 IPR003340 GO:0003677
Car06g00832 219 SUPERFAMILY DNA-binding pseudobarrel domain 102 204 IPR015300 -
Car06g00832 219 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 68 214 IPR005508 GO:0003677
Car06g00832 219 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 68 214 - -
Car06g00832 219 SMART B3_2 102 210 IPR003340 GO:0003677
Car06g00832 219 Gene3D - 97 218 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00832 Car-Chr6 8146202 8146861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00832 99 215 B3 DNA Binding Superfamily AT4G03170 44.068 2.37e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car06g00832 B3 1.1e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00832 - - mtr:MTR_3g013810 164.466