Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00821 ATGGACGCTTACGGTGGTTACTTGGTCGATGAGAAAGCCGTTAGGGTTGAAAATGCTTTCTTAGATTTTCTCAAAAGTTTTAGATCCGGACAACGTAACGAACTATATTACGAAGCGGAAATTGAAGTGATGAGAGCCAACGAGTCTAACACCATGTTCATTGATTTCGATCACGTTATCAGATTCAGCGATCTCCTTCAGAAAGCTATTTCAGATGAATATTTGAGGTTTGAACCTTACTTGCAAAACGCCTGCAAGAGGTTTGTTATGGAGCTCAAGCCAACCTTTATTTCTGACGATAATCCTAACAAGGACATCAATGTTGCCTTCTACAACATTCCAATTGTCAACAGGTTAAGGGATTTGGCTACATCAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGAAGACTTGTATCCGTGACAGGAGTGGTAACAAGGACAAGCGAGGTTCGGCCAGAGCTTCTCCAAGGGACTTTCAAGTGCCTGGACTGTGGTGGGGTTATAAAGAATGTTGAACAACAATTCAAGTATACTGAGCCAACAATATGTCCAAATGCTACCTGTAACAATAGAACAAGGTGGGCACTGCTGCGTCAAGAGAGCAAATTTACTGATTGGCAAAGGGTCAGAATGCAGGAGACGTCCAAAGAGATACCTGCCGGCTCTCTGCCTAGGTCTTTGGATGTTATTCTTCGTCATGAGATTGTGGAACATGCCAGGGCTGGTGACACGGTGATTTTTACTGGCACTGTAATTGTCATACCTGATATAATGGCAATGGCGTCCCCTGGAGAGAGATCAGAATGTCGAAGGGAAGCCTCTCAACGCAAGGGTTCTTCGTCAGGAAATGAAGGTGTGAGGGGCCTTAAGGCTTTGGGTGTCAGAGACCTCTCCTATCGTCTAGCGTTTATTGCCAACTCCGTTCAGATTTGTGACGGTCGAAGAGAAACGGATATCAGGAATAGAAAGAAGGATTCAGACGAAGATGATCAGCAATTTTCCGCACAGGAATTGGATGAAGTTCAACGAATGAGGAATACTCCAGATTTCTTCACCAAACTTGTTGAGAGTGTTGCACCAACTGTTTTTGGTCATCAAGATATAAAACGAGCAATCCTTCTAATGCTTATGAGTGGGGTCCACAAATCTACTCATGAAGGCATTAGCCTTAGAGGGGACATTAATGTTTGTATTGTTGGAGATCCTAGCTGTGCAAAGTCTCAATTTCTTAAGTATACTTCTAGCATTGTTCCAAGATCTGTGTATACATCTGGGAAATCATCATCTGCTGCTGGTTTGACTGCAACTGTTGCCAAGGAACCAGAAACTGGGGAGTTTTGTATTGAGGCTGGTGCTTTGATGCTTGCTGACAATGGCATTTGCTGCATTGATGAATTTGACAAGATGGACATCAGAGATCAGGTTGCTATTCATGAGGCCATGGAACAACAAACAATTAGTATCACTAAAGCAGGAATACAAGCAACACTCAATGCTCGTACATCCATTCTTGCTGCTGCTAACCCTGCTGGAGGACGATATGATAAGTCTAAACCACTTAAGTACAATGTGGCTCTTCCACCGGCTATACTTTCAAGGTTCGATCTTGTATACATTATGATTGATGACCCAGAAGAAGTTACAGATTATCACATAGCACATCATATTGTGCGAGTTCATCAAAAGCATGAAGATGCACTTGCTCCAACGTTCACTACGGCAGAACTGAAGCGTTATATAGCATATGCAAAAACTCTTAAACCAAAGCTCACGTCAGATGCAAGAAAATTGCTGGTAGACTCTTATGTTGCTCTCCGTAAGGCTGATACAAATCCTGGCAGTAGGGTTGCGTATCGTATGACAGTTAGGCAGTTGGAGGCTTTAATCAGGCTGTCGGAAGCCGTTGCACGGTGTCATTTGGATAATCAGGTACAACCTCGTCATGTACGTTTAGCAGTAAAACTGCTGCAAACATCCATAATAAGAGTGGAGTCCAGTGAGATTGATCTGTCTGAGTTTCAAGACGAAGACAGAGACGAAGACTTGGGCACTGGTGATGGAAATGataataataataataataatgatgataataataataataataataataataatGATGATGCTGATGGTCAAGCTGGAAACTCTACTGCCGAGCAAGCCGCTAGAACTAGTGAAAAACCAGCAGATGGACCTAACCCACAAGGGAAGAAACTTATAATAAGTGATGAATATTTTCAGAGGATTACCAGGGCCCTTGTCATGTGTCTTAGACAGCACGAAGAGTCTGTGATGCGAGAAGGAAGCGGTTTGGCTGGGATGAGGCAACGAGATTTGATTAAATGGTATGTAAACCAGCAAAATGAGAAAAATGTTTACACTTCAATGGAGGAGGCGTCAGCTGAAATTTCCAAAATTAAAGCAATTATTGAGAGTTTAATTCGAAGAGAGGGGCATTTGATAGTGGTGGATGATGGTAGGCAagcagcagcagaagcagctggagcagagcaATCCGCGTCTGCAGCTAGAAATGATAGAATTTTGGCTGTGGCTCCTAATTATGTCATTGATTGA 3159 0.3378 MDAYGGYLVDEKAVRVENAFLDFLKSFRSGQRNELYYEAEIEVMRANESNTMFIDFDHVIRFSDLLQKAISDEYLRFEPYLQNACKRFVMELKPTFISDDNPNKDINVAFYNIPIVNRLRDLATSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLVSVTGVVTRTSEVRPELLQGTFKCLDCGGVIKNVEQQFKYTEPTICPNATCNNRTRWALLRQESKFTDWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEHARAGDTVIFTGTVIVIPDIMAMASPGERSECRREASQRKGSSSGNEGVRGLKALGVRDLSYRLAFIANSVQICDGRRETDIRNRKKDSDEDDQQFSAQELDEVQRMRNTPDFFTKLVESVAPTVFGHQDIKRAILLMLMSGVHKSTHEGISLRGDINVCIVGDPSCAKSQFLKYTSSIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPAGGRYDKSKPLKYNVALPPAILSRFDLVYIMIDDPEEVTDYHIAHHIVRVHQKHEDALAPTFTTAELKRYIAYAKTLKPKLTSDARKLLVDSYVALRKADTNPGSRVAYRMTVRQLEALIRLSEAVARCHLDNQVQPRHVRLAVKLLQTSIIRVESSEIDLSEFQDEDRDEDLGTGDGNDNNNNNNDDNNNNNNNNNDDADGQAGNSTAEQAARTSEKPADGPNPQGKKLIISDEYFQRITRALVMCLRQHEESVMREGSGLAGMRQRDLIKWYVNQQNEKNVYTSMEEASAEISKIKAIIESLIRREGHLIVVDDGRQAAAEAAGAEQSASAARNDRILAVAPNYVID 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00821 1052 Coils Coil 990 1010 - -
Car06g00821 1052 Pfam MCM OB domain 328 448 IPR033762 -
Car06g00821 1052 MobiDBLite consensus disorder prediction 865 933 - -
Car06g00821 1052 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 328 1001 IPR031327 GO:0003677|GO:0005524|GO:0032508
Car06g00821 1052 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 10 126 IPR031327 GO:0003677|GO:0005524|GO:0032508
Car06g00821 1052 ProSitePatterns MCM family signature. 653 661 IPR018525 GO:0003677|GO:0005524|GO:0006260
Car06g00821 1052 Gene3D - 529 859 IPR027417 -
Car06g00821 1052 MobiDBLite consensus disorder prediction 458 479 - -
Car06g00821 1052 Pfam MCM N-terminal domain 18 112 IPR027925 -
Car06g00821 1052 SUPERFAMILY Nucleic acid-binding proteins 328 450 IPR012340 -
Car06g00821 1052 Gene3D - 347 398 - -
Car06g00821 1052 ProSiteProfiles MCM family domain profile. 544 750 IPR001208 GO:0003677|GO:0005524|GO:0032508
Car06g00821 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 554 858 IPR027417 -
Car06g00821 1052 Pfam MCM P-loop domain 532 754 IPR001208 GO:0003677|GO:0005524|GO:0032508
Car06g00821 1052 PRINTS Mini-chromosome maintenance (MCM) protein family signature 673 686 IPR001208 GO:0003677|GO:0005524|GO:0032508
Car06g00821 1052 PRINTS Mini-chromosome maintenance (MCM) protein family signature 645 659 IPR001208 GO:0003677|GO:0005524|GO:0032508
Car06g00821 1052 PRINTS Mini-chromosome maintenance (MCM) protein family signature 724 732 IPR001208 GO:0003677|GO:0005524|GO:0032508
Car06g00821 1052 PRINTS Mini-chromosome maintenance (MCM) protein family signature 585 600 IPR001208 GO:0003677|GO:0005524|GO:0032508
Car06g00821 1052 PRINTS Mini-chromosome maintenance (MCM) protein family signature 697 709 IPR001208 GO:0003677|GO:0005524|GO:0032508
Car06g00821 1052 SMART mcm 329 855 IPR031327 GO:0003677|GO:0005524|GO:0032508
Car06g00821 1052 MobiDBLite consensus disorder prediction 880 917 - -
Car06g00821 1052 Gene3D - 8 115 - -
Car06g00821 1052 Gene3D - 328 448 IPR012340 -
Car06g00821 1052 Pfam MCM AAA-lid domain 769 854 IPR041562 -
Car06g00821 1052 SUPERFAMILY Nucleic acid-binding proteins 20 125 IPR012340 -
Car06g00821 1052 Gene3D - 929 1052 - -
Car06g00821 1052 Pfam MCM6 C-terminal winged-helix domain 931 1051 IPR041024 -
Car06g00821 1052 CDD MCM6 547 853 - -
Car06g00821 1052 PANTHER DNA REPLICATION LICENSING FACTOR MCM6 328 1001 - -
Car06g00821 1052 PANTHER DNA REPLICATION LICENSING FACTOR MCM6 10 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00821 Car-Chr6 8048169 8054265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00821 1 126 Core DNA Replication Machinery Family AT5G44635 66.142 3.39e-51 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00821 K02542 - gmx:100787290 1158.28