Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00809 ATGGACTTCTTGTTATTTGTATCATTAATTTTGGCATGCTTGTGTTCTTCTGTGTCGCCTGATCCGCAAGGAGATGCACTGATTGCATTGAAGTTATCACTGAATGCTTCAGGTCACCAGCTTAGTGACTGGAATGAAAATCAAGTCAACCCTTGTACCTGGTCACGTGTTTACTGTGACTCAAACTACAAAGTTATTCAAGTTTCACTAGCGATGATGGGATTCACAGGACGCTTGGCCCCAAGGATAGGAACTCTAAAATATCTCACTACTCTTTCTTTGCAAGGAAATGGCATCACCGGTGACATACCAAAAGAGTTGGGAAACCTGACAAGCTTGATCAGGTTGGATTTGGAAAACAACAGATTAACTGGTGAAATACCGCAGTCCCTTGGTAATCTTAAAAAGCTACAGTTCTTGACATTGAGTCAAAACAATCTCAGTGGATCTATACCTGAATCACTTGCCAATCTTTCAAGCTTGAACGATATTCAGCTAGATTCAAACAATCTTAGCGGCCGAATTCCGGAGCAGTTACTTGAAGTTCCTAAGTACAATTTCAGCGGAAATAAGTTGGACTGTGGTGTGAATTATGGTCAGCCTTGTGCATTTAATAATGCCGATCAAGGTTCATCACATAAACCAATTGGCCTCATAATTGGAATTAGTGTAGCATTTGTAGCTATCCTTGTTATTGTTGGTCTGCTGTTATTTTGGTGCAAGGCTAGACACAAGGGATACAAGCGTGAAGTTTTTGTAGATGTTCCAGGTGAAGTTGATCGGCGAATTGCATTTGGACAGCTAAAAAGATTTGCATGGAGAGAACTACAAATAGCTACTGACAACTTCAGCGAGAAAAATGTTTTAGGACAGGGAGGCTTTGGAAAGGTTTATAAAGGTGTCCTTGCTGATAACACAAAAGTTGCTGTCAAAAGGTTAACTGATTATGAAAGCCCTGGGGGAGATGCAGCTTTCCAGCGTGAAGTTGAGATGATAAGTGTAGCTGTTCATAGGAACTTGTTACGGCTGATTGGGTTTTGTACTACTCCAACTGAACGCCTCTTAGTTTATCCCTTCATGCAAAACTTAAGCGTTGCCTATCGTCTACGAGAACTCAAACCTGGGGAATCTGTTTTGGATTGGCCTACAAGAAAACAAGTGGCTCTGGGAACTGCACGTGGCCTAGAATATCTTCATGCGCATTGCAGTCCTAAGATTATTCATCGGGATGTGAAAGCAGCTAATGTATTACTAGATGAAGATTTTGAGGCAGTTGTCGGCGACTTTGGTTTGGCAAAGTTAGTAGATATTCGAAAGACTAATGTGACAACTCAAGTTCGTGGGACAATGGGCCATATAGCTCCTGAGTATTTGTCAACCGGAAAGTCTTCAGAAAGGACTGATGTTTTTGGTTATGGGATTATGCTTCTGGAGATTGTTACAGGTCAACGGGCAATTGACTTCTCACGTTTGGAAGAGGAAGATGATGTGTTGTTGCTTGACCATGTTAAGAAATTAGAACGAGAGAAAAGACTAGATGCTATTGTTGATCGCAACCTAAAGAAAAATTTCAACATGCAAGAGGTAGAAATGATGATAAAAGTTGCGCTACTCTGCACCCAAGCAACGCCAGAGGATCGTCCACCGATGTCTGAGGTTGTAAGAATGCTAGAAGGAGAAGGATTGGCTGAAAGGTGGGAGGAATGGCAGCACGTGGAGGTCCATCGAAGACAAGAATACGAGAGATTACAAAGAAGATTTGACTGGGGAGAAGATTCAGTTTATAATCAAGATGCCATTGAGTTGTCTGGTGGCAGATGA 1821 0.4179 MDFLLFVSLILACLCSSVSPDPQGDALIALKLSLNASGHQLSDWNENQVNPCTWSRVYCDSNYKVIQVSLAMMGFTGRLAPRIGTLKYLTTLSLQGNGITGDIPKELGNLTSLIRLDLENNRLTGEIPQSLGNLKKLQFLTLSQNNLSGSIPESLANLSSLNDIQLDSNNLSGRIPEQLLEVPKYNFSGNKLDCGVNYGQPCAFNNADQGSSHKPIGLIIGISVAFVAILVIVGLLLFWCKARHKGYKREVFVDVPGEVDRRIAFGQLKRFAWRELQIATDNFSEKNVLGQGGFGKVYKGVLADNTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKPGESVLDWPTRKQVALGTARGLEYLHAHCSPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDIRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLEIVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLKKNFNMQEVEMMIKVALLCTQATPEDRPPMSEVVRMLEGEGLAERWEEWQHVEVHRRQEYERLQRRFDWGEDSVYNQDAIELSGGR 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00809 606 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 606 - -
Car06g00809 606 ProSiteProfiles Protein kinase domain profile. 283 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00809 606 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Car06g00809 606 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 606 - -
Car06g00809 606 SUPERFAMILY Protein kinase-like (PK-like) 263 558 IPR011009 -
Car06g00809 606 Gene3D Transferase(Phosphotransferase) domain 1 360 577 - -
Car06g00809 606 SMART serkin_6 283 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00809 606 Pfam Leucine rich repeat 88 147 IPR001611 GO:0005515
Car06g00809 606 Pfam Protein kinase domain 284 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00809 606 Gene3D Phosphorylase Kinase; domain 1 252 359 - -
Car06g00809 606 SUPERFAMILY L domain-like 23 192 - -
Car06g00809 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Car06g00809 606 Pfam Leucine rich repeat N-terminal domain 20 60 IPR013210 -
Car06g00809 606 Gene3D Ribonuclease Inhibitor 21 204 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00809 Car-Chr6 7941703 7949759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00809 4 606 Receptor kinase-like Gene Family AT5G10290 75.622 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Car06g00809 Pkinase 9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00809 - - gmx:100811547 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00809 06 7941703 7949759 Car06g00809 06 7941703 7949759 ECH