Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00804 ATGGCTCACAACCACCTTCACCCTAATCAATTTGATACTATTGAGCAAATTTTATCAGAAGCACAACATCGATGGTTACGTTCAACTGAAATTTGCCAAATTCTCACTAATTATAACAGCTTTCAGATTGCTTCACAACCTTCACATATGCCTCCAAGTGGTTCAGTTTTCTTATTTGATCGGAAGGTGATGAGATACTTTAGAAAGGATGGTCATAATTGGAGGAAGAAAAAAGATGGAAAAACTGTTAGGGAAGCTCATGAGAGACTCAAGGCTGGAAGTGTGGATGTATTGCATTGCTACTATGCTCATGGAGAACAAAATGAAAATTTTCAAAGACGTACTTACTGGATGCTTGAGGAGGAACTCTCACACATTGTTCTAGTCCATTATCGTCAAGTGAAGGGAGTTACCAAGGCTAATTTTATATGTGGCAAAGAAAATGAAGAATATCATCCTTATGCTCAACAAACAGACAAAGTTATGCCTAACACAAAGATGGAGACTTTTTTATCGTCGAGTCTTAATCCACTTAGTTACCAGCTTCAGTCGCAAACTATGGATACAAGCATAAACAGTTTTCAAGCATCAGAATATGAAGAGGCTGAATCAGCATTCAATAGCCACGAAAATTCCGATTTGTACTCGTTTCTTGAGCTGCAACACCCTTTTGTTCATAAGATTAAAGCTCAACTAGCTGATTCTAATTCTCCTCTACCACTCAAAGATGATCAAGAAAGGTTACCTGTCATTCCTCAGGTGGATTATATCTCACTCAGTCAAGCTAATGAAACCAAATACATTAATAATGCTAGATTGACATGTGAATCCTCAAAACTCCTGGGCTTTTCATCATGGGAAGATATCTTAGAAAATAATGCTGGATGTCATAATGTGATTTCTCAGCCTTCATTTCCTGAAACACAACACAATAACATGAATTTAAATAGTACTTACCAAGGATATGACATAATGGGCCAACATTTTACCATCAGCATTACTAAACAACATGAGAATGGAAGTCTTATACAAGCTGAAGGAAATTGGCAGGCATCTCATTTTAATTCTTTAAGTTCATCAAATTGGCCCGAAGATAGTGCGTGTTCAGGCTCAACATGCGAGGTTGGTTATAGTGACTGTGAGCAGGAAGTTAATGAAGTTGATCTTCAACAATCCCTGGAACAATTCCTTCTTCATCCGCACCAACAACACGAGGTTCTTATGCAAAATAGCCCTCGTGAAATACTTTTAAACGAAGAAGACAAGTTAGAATCAGAACTAGAGGTGGATAGAAGCATAGATGGAATAGAAGACACTCATTTCACTTCAAAGAAGACTCTATTAGATGTATCTGTGGCAGAAGAGGGCCTGAAGAAGCTTGACAGTTTCAACCAATGGATGAGTAAAGAGCTTGGAGATGTTGAAGAATCAAGCAACCGATCCACTTCTAGTACTTACTGGGATACAGTTGAAAGTGAAAATGAAGTTGGAAACTATGTACTTGATCCATCTATTAGCCATGATCAGCTCTTCAGCATAATTGATTACTCCCCAAGCTGGACATTTGAATACTCAGAAATTAAGGTTCTCATTTCAGGCCGATTCTTAAAGAGTCAGCATGAAGCAGAAGATTGTAAATGGTCATGTATGTTTGGCGAGGTAGAAGTGCCAGCAGAGGTAATCGGGAACGGTGTTCTCTGTTGTCATACTCCTCCACACAAGGCTGGCAGGGTTCCTTTCTATGTAACATGTTCCAATAGATTAGCATGTAGTGAACTGCGCGAATTTGATTTCTGCGTTAATTATACTCAAGAAGTTTACACTGCAGGTGAGAACAGAAGCAGCATAACTTTTGATAGTTTTAATAAACGATTTGGAGATTTGTTGTCCTTGGAGCATGACTTCAATCACAGTTTAGATTCAATCAGTGTGAGTGAGAAATCTAATGAGAAATATCAACTGAGAAGTAAAATCAGTTCGTTGCTTAGGAGGGAGGATGATGAATGGGATAAACTACTGAAATTTACCCTAGAGAAAGATTTTTCTCCAGAACTTGTACAGGAGCAGCTGCTAGAAGATCTTCTGAAAGATAAGCTACATTCATGGCTCCTTCAGAAAACAACTGAAGATGGGAAAGGTCCAAATGTATTAGATGAAAGTGGCCAAGGTGTGCTTCATTTTGCAGCTGCTCTTGGCTATGGTTGGGCGTTAGAACCAACAATAATTGCTGGTGTGAATGTAAACTTTCGCGATGTAAATGGATGGACTGCTCTTCATTGGGCTGCGGTTTGTGGCAGGGAGCGAACAGTTGCTTCTCTCATATCTCTTGGAGCGGCACCAGGAGCACTTACTGATCCATGCCCAAAACATCCTTCTGGTAGAACACCAGCTGATCTAGCTTCTGAAAATGGACACAAAGGAATTGCAGCTTATCTTGCAGAATATTTCCTAAGTGCACAACTCAAGTCTCTTGATTTGAAGAGAGACTTGGGAGAAAATTTTGGAGAAAAAATAATACAAAGAATCCAAGAACAAAACACTGCTAAAGAGGTCCTCTCACATGAACTGTCATTGAAAGATTCACTGGCTGCAGTATGCAATGCAACACAAGCTGCTGCTCGTATTCATCAAGTTTTCAGAGTGCAATCATTCCAGAGAAAACAAAAACAACAAAAGGAATATGGTGATTACAAATTTGGAGTATCTGATGAACGTGCTCTTTCACTAATAACAATAAATGCAAAGTCACACAAGTTTGGACAATGTTATGAGCCTGTTCATATTGCTGCTACAAGAATTCAGAACAAGTTCCGCAGTTGGAAAGGCAGAAAAGATTTTTTGATTATTCGACGGCGAATTGTGAAAATTCAGGTACATTTGTTTCCAACCTTTGCATGTAATAATGTGCAAATGATGTTAGTACTATTTTTGTTTGTGTATAATGTTTGTTATGTTACTGCATGCTTCATTTGCTACTACTTTCAAATATAA 2991 0.3852 MAHNHLHPNQFDTIEQILSEAQHRWLRSTEICQILTNYNSFQIASQPSHMPPSGSVFLFDRKVMRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEQNENFQRRTYWMLEEELSHIVLVHYRQVKGVTKANFICGKENEEYHPYAQQTDKVMPNTKMETFLSSSLNPLSYQLQSQTMDTSINSFQASEYEEAESAFNSHENSDLYSFLELQHPFVHKIKAQLADSNSPLPLKDDQERLPVIPQVDYISLSQANETKYINNARLTCESSKLLGFSSWEDILENNAGCHNVISQPSFPETQHNNMNLNSTYQGYDIMGQHFTISITKQHENGSLIQAEGNWQASHFNSLSSSNWPEDSACSGSTCEVGYSDCEQEVNEVDLQQSLEQFLLHPHQQHEVLMQNSPREILLNEEDKLESELEVDRSIDGIEDTHFTSKKTLLDVSVAEEGLKKLDSFNQWMSKELGDVEESSNRSTSSTYWDTVESENEVGNYVLDPSISHDQLFSIIDYSPSWTFEYSEIKVLISGRFLKSQHEAEDCKWSCMFGEVEVPAEVIGNGVLCCHTPPHKAGRVPFYVTCSNRLACSELREFDFCVNYTQEVYTAGENRSSITFDSFNKRFGDLLSLEHDFNHSLDSISVSEKSNEKYQLRSKISSLLRREDDEWDKLLKFTLEKDFSPELVQEQLLEDLLKDKLHSWLLQKTTEDGKGPNVLDESGQGVLHFAAALGYGWALEPTIIAGVNVNFRDVNGWTALHWAAVCGRERTVASLISLGAAPGALTDPCPKHPSGRTPADLASENGHKGIAAYLAEYFLSAQLKSLDLKRDLGENFGEKIIQRIQEQNTAKEVLSHELSLKDSLAAVCNATQAAARIHQVFRVQSFQRKQKQQKEYGDYKFGVSDERALSLITINAKSHKFGQCYEPVHIAATRIQNKFRSWKGRKDFLIIRRRIVKIQVHLFPTFACNNVQMMLVLFLFVYNVCYVTACFICYYFQI 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00804 996 SUPERFAMILY E set domains 513 598 IPR014756 -
Car06g00804 996 ProSiteProfiles CG-1 DNA-binding domain profile. 14 140 IPR005559 GO:0003677
Car06g00804 996 SMART CG_1_2 17 135 IPR005559 GO:0003677
Car06g00804 996 Gene3D - 684 825 IPR036770 -
Car06g00804 996 SUPERFAMILY Ankyrin repeat 709 816 IPR036770 -
Car06g00804 996 Pfam CG-1 domain 20 133 IPR005559 GO:0003677
Car06g00804 996 ProSiteProfiles IQ motif profile. 927 955 IPR000048 GO:0005515
Car06g00804 996 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 9 961 - -
Car06g00804 996 ProSiteProfiles Ankyrin repeat profile. 753 785 IPR002110 GO:0005515
Car06g00804 996 Gene3D Immunoglobulins 506 601 IPR013783 -
Car06g00804 996 SMART ANK_2a 792 821 IPR002110 GO:0005515
Car06g00804 996 SMART ANK_2a 753 782 IPR002110 GO:0005515
Car06g00804 996 Pfam IPT/TIG domain 513 591 IPR002909 -
Car06g00804 996 ProSiteProfiles Ankyrin repeat region circular profile. 753 778 - -
Car06g00804 996 Pfam Ankyrin repeats (3 copies) 725 815 IPR002110 GO:0005515
Car06g00804 996 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 9 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00804 Car-Chr6 7915347 7922273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00804 14 960 CAMTA Transcription Factor Family AT5G64220 42.368 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Car06g00804 Ank_2 1.2e-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00804 K21596 - gmx:100798875 1385.16