Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00789 ATGACTCAGCAGAATGTCGTAGTCTCTGAAACCAAATCAGGAATCAACGCTGCTATTACAATGACACAAAAGCCACCCGCACCACCCGCTGGTTACATTCCTATTCCAAGAAGGAGAATTTTGAAGAACCTTGAAATCAACGCTGGACAGAGAATCAATACATGTATTGATTCTATGAGAGCTTCTTCTCCAACTCATGTTAAATCAACACCTTCTTTCGCTGAAGAATACAACTCTTGGATTCTTCGGCACCCATCAGCATTAGACATGTTTGAACAAATTAAGGATGCATCAAAGGGAAAACAAATTGTCATGTTTTTGGACTATGATGGTACTTTGTCTCCTATTGTTGATGACCCTGACCGTGCTTTCATGTCGGAATCGATGAGGAAAACAGTGAGGAAGCTTGCAAGGTGTTTTCCTACTGCAATTGTTACTGGAAGATGCATAGACAAAGTTTACAATTTCATTCGCTTGGCTGAGCTATATTATGCTGGAAGCCATGGTATGGATATTAAAGGGCCAACAAAAGAGTCCAAATACAACAAAAATAACAAAGCAGAGGCACTTCTTTTTCAACCTGCCAGAGAATTTGTTCCTATGATAAATGAGGTATACCAAAAATTAGTTGAGAAAACAAAATCAACTCCTGGTGTCATAGTCGAGAATCACAAATTTTGCGCCTCTGTTCATTTTCGCTGTGTTGATGAAAAGAGATGGATTGAATTAGCACAGCAAGTGAAATCTGTGTTAAAAGAATACCCGAAACTTCATCTTACCCATGGAAGAAAGGTATTGGAGATTCGTCCCTCTATTAAATGGGACAAGGGGAAAGCCTTGGAATTTTTGTTAGAGACACTTGGATTTGCCAACTGTAACGATGTATTTCCTGTATATATTGGTGATGATAAAACCGATGAAGATGCATTCAAGAAATTAAGTGACAGAGGACAAGGTTTTGGAATTTTGGTCTCTAAATTTCCAAAGGAAACTACTGCATCATACTCTTTACAAGAACCCAATGAGGCAAGCATAATTTCGATTTTTTACCATCATATCATATGCTTTAAATAG 1074 0.3818 MTQQNVVVSETKSGINAAITMTQKPPAPPAGYIPIPRRRILKNLEINAGQRINTCIDSMRASSPTHVKSTPSFAEEYNSWILRHPSALDMFEQIKDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSESMRKTVRKLARCFPTAIVTGRCIDKVYNFIRLAELYYAGSHGMDIKGPTKESKYNKNNKAEALLFQPAREFVPMINEVYQKLVEKTKSTPGVIVENHKFCASVHFRCVDEKRWIELAQQVKSVLKEYPKLHLTHGRKVLEIRPSIKWDKGKALEFLLETLGFANCNDVFPVYIGDDKTDEDAFKKLSDRGQGFGILVSKFPKETTASYSLQEPNEASIISIFYHHIICFK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00789 357 SUPERFAMILY HAD-like 104 351 IPR036412 -
Car06g00789 357 TIGRFAM T6PP: trehalose-phosphatase 101 342 IPR003337 GO:0003824|GO:0005992
Car06g00789 357 Pfam Trehalose-phosphatase 106 340 IPR003337 GO:0003824|GO:0005992
Car06g00789 357 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 346 - -
Car06g00789 357 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 346 IPR044651 GO:0004805|GO:0005992
Car06g00789 357 Gene3D - 105 337 IPR023214 -
Car06g00789 357 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 105 314 IPR006379 -
Car06g00789 357 CDD HAD_TPP 104 340 - -
Car06g00789 357 Gene3D - 185 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00789 Car-Chr6 7811731 7814046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00789 105 313 Trehalose Biosynthesis Gene Families AT1G23870 25.688 5.71e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00789 K01087 - gmx:100794430 577.4