Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00772 ATGCATTTGCATTTTCAATCATTCAAGGTGGAAGCAGTAAACAGTGTCTCTTCAGTCAGCCATGCTGCCACTGATCTGGAAAGGAACGGTGACGGGAAGGCTCAAGATTCAGAGCCCCCAACTCCCCATTCTACTCTGAAGATGGGATTGAGAGATCGTAATAGCAGCATGGAGGATCCAGATGGGACATTAGCTAGTGTTGCTCAATGCATTGAGCAGCTGCGCCAGAGCTCATCTTCTGTGCACGAGAAAGAGTATTCCTTAAGGCAGTTATTGGATCTTATAGATATGCGTGAAAATGCATTTAGTGCTGTTGGATCTCACTCTCAAGCAGTTCCAGTGCTTGTTTCCCTTCTCCGGTCAGGTTCGTTGAATGTGAAGATACAGGCAGCAACTGTCTTGGGCTCACTTTGTAAAGAAAATGAACTGAGGGTGAAAGTCTTGCTTGGAGGATGCATTCCTCCATTGCTTGGTCTACTAAAGTCCAGTTCTACTGAAGGCCAAATTGCTGCTGCAAAGACTATATATGCTGTCTCTCAAGGTGGCGTGAAAGATCATGTTGGATCGAAAATATTTTCCACCGAAGGAGTAGTGCCAGTGCTTTGGGAGCAGTTGAATACTGGCCTGAAAACCGGAAATACAGTTGAAAGTTTACTGACGGGAACATTGAAAAATCTCTCTAGCAATGCCGAGGGATTCTGGAATTCAACAATTCAAGCTGGAGGAGTGGACATATTACTGAAGTTATTGGCGATGGGACAGCCTAGCACTTTAGCCAATGTTTGCTTTTTACTTGCTTCTGTAATGATGGAGGATGCATCTGTTTGTTCGAAGGTATTGTCCGCAGAGGTCACTAAACAACTCCTGAAACTATTAGGCCCTGGTAACGATGACCTCGTTAGAGCTGAATCAGCTGCTGGTTCTAATGGCATCCCTGCTTTGATCAATGCTACCATAGCTCCTTCCAAAGAATTCATGCAGGGTGAGTGTGCTCAAGCATTACAAGAGAATGCTATGTGTGCTTTAGCAAACATCTCTGGTGGTTTGTCTTATGTCATATCTAGCCTCGGTCAAAGTCTTGAATCATGCTCCTCGCCTACCCAAATTGCAGATACATTAGGAGCTATAGCATCAGCTCTTATGATATATGATAACAAGGCAGAATCTACCAAACCGTCAGATCCGTTGGTGGTTGAACAGACATTACTCAAACAATTTAAACCTCGCTTACCTTTCCTCGTGCAAGAACGGACCATTGAAGCTCTAGCTAGTTTATATGGAAATCCCATACTCTCATCTAAACTAGCAAATTCTGATGCAAAACATTTGCTTGTTGGTTTAATAACAATGGCTGCCAATGAAGTGCAAGATGAGCTTATAAAAGCTCTATTGACACTATGCAAAAGTGAAGGCAGCCTATGGCGTGCACTTCAGGGCCGCGAAGGAGTTCAGCTACTGATATCTCTTCTCGGTCTTTCGTCAGAACAGCAGCAAGAATGTGCAGTTGCCTTGCTTTGCCTTTTATCTAATGAAAATGACGAAAGTAAATGGGCAATTACTGCTGCTGGTGGTATACCTCCACTTGTTCAAATTTTGGAGACAGGATCTGCAAAAGCAAAGGAAGATTCTGCAAGAATCCTCAAGAACTTGTGCAATCATAGTGAAGATATACGTGCATGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCCTAATGGGAAGGATATTGCAGCAAAGACAATAAATCATTTGATTCATAAATCCGATACTACGACTATCAGTCAGCTTACAGCGTTATTGACTAGCGACCTTCCAGATTCAAAAATATATGTTTTGGATGCTTTGAGAAATATGCTTTCTGTTGCTCCTCTTAGCGACATTTTACGTGAAGGTAGTGCTGCCGGTGATGCCTTTGACACCATGATAATGTTATTGAGCTCTCCCAAGGAAGAAACTCAGGCAAAATCTGCTTCAGCTCTGGCTGGTATTTTCGAAGCAAGGAAAGATGTGCGTGAAAGTAGCGTAGCTGTCAAAACTCTTTCGTCAGCTATGAAATTGCTTAATGTTGAATCTGAAAGTATCCTAATGGAGTCCTCAAACTGCTTGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCAGCTGTTGCTAGAGATGCATTATCCCCACTAGTTGCACTAGCTAACTCTTCGGTTTTGGAAGTGGCAGAGACAGCAGTAGGTGCCATAGCAAATCTTATTTTGGACAGTGAAATAGCAAAAAGAGTTGTTGCAGAAGAAGTAATCTTGCCTGCTACCAGAGTATTACAAGAAGGCACGATTTCTGGTAAAACTCATGCCGCAGCAGCAATTGCTCGCCTCTTACATTCTCATAAAGTTGATAAAGCTGTTACTGACTGTGTGAACCGCGCCGGCACTGTTCTAGCACTAGTTTCATTTTTGGATTCATCTGTCGATGGATCTGTTGCCACATCAGAGGCTCTAGAAGCACTTGCCATTCTGTCCAGGTCAGAAGAGACCGGTGCAAATATTAAACCAGCATGTGCAATTTTGGCTGAATTCCCTGAAAGCATAAGCCCGATAGTCCTTTGCATTGTTAATTCAACACCGACATTGCAAGATACAACGATCGAGATCTTATCTCGATTATGTAAAGATCAGCCTGTTGTTTTAGGAGATACTGTTGCTTCAGCCTCTGGATGTATATCTTCAATAGCTAAGAGGATAATAAGTTCCACAAATGTAAGGGTCAAAATTGGTGGCGCTGCCCTTCTTATTTGTACTGCAAAAGTGAATCATCAGAGACTGGTGGAGGATCTCAATATATCAAACTTGTCTGCTAACCTTATTCAGTCTCTAGTTGATATTCTTATTTCTTCACAACCTTCTTCGGGTAATCAGAGTGATGATGACAATGAATCCATCAGCATATGCAGGCATACAAAAGAAGAGGTCGATAGCTGTGAATCCAAAACCGGAACTTCCATTATATGTGGTGTTGACTTAGCTATATGGTTACTGTCTATTCTTGCTTGTCATGATGGAAAAAATAAAACAGCATTAATGGAGGCTGGTGCAATCGATGTTCTCGCCGATAGGATCTCAAATTGTTATTCACAATATTCTCAGATCGACTACAAAGAAGATTACAGCATGTGGATTTGCGCCTTGTTGTTGGCAATATTATTTCAAGATAGAGATATCATACGGGCACATGCAACGATAAAGTCTGTACCAGCACTCGCCAATTTATTGAAGTCAGAGGAATCGGCAAACAAATATTTTGCTGCACAATCAATAGCAAGCCTTGTTTGCAACGGTAGCAGGGGAACAATTCTGTCTGTGGCAAATTCTGGTGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCCGATACTGATATACAAGATCTTCTCGAATTGTCAGAGGAATTTTCTTTGGTGCGTTATCCTGATCAAGTGGCTCTAGAGAAGTTGTTTAGAGTTGATGATATAAGAGTTGGCGCCACTTCTCGGAAGGCAATACCTGCCCTAGTTGATCTTCTCAAACCGATTCCAGATCGCCCAGGAGCACCATTTTTAGCTCTCGGGCTTTTGACTCAGCTTGGTAGAGATTGTCCATCAAATAAGACTGTAATGGTAGAATCGGGGGCTTTAGAGGCTCTTACGAAGTATCTTTCCCTCGGTCCACAAGATGCAACCGAAGAAGCTGCTACAGATCTGCTAGGAATTCTGTTTAGTAGTGCTGATATACGAAAACACGACTCTGCATTTGGTGCTGTTACTCAGCTTGTAGCTGTCCTACGTTTAGGAGGAAGAGGGGCAAGATATAGTGCTGCAAAAGCATTGGAAAGTTTATTTTCTGCAGACCACATTAGAAATGCCGAAATTTCTCGACAAGCTGTTCAACCGTTGGTTGAAATTCTTAGTACTGGTTCAGAAAGGGAGCAGCATGCTGCAATTGCTGCATTGGTTGGTTTACTGAGTGAAAATCCGTCAAGAGCACTTGCTGTTGCAGATGTTGAGATGAATGCAGTGGATGTTCTTTGTAGGATCCTTTCGTCGAATTGTTCAATGGACCTCAAAGCGGATGCTGCTGAATTATGCTGTGCTCTTTTTGGAAATACAAGGATTCGGTCCACGATGGCTGCTGAACGATGTGTTGAACCATTAGTCTCTCTCCTTGCAACTGAGTTTAGTTCCGCTCATCATTCGGTTGTCCGGGCATTGGATAGGCTTGTTGATGATGAGCAACTTGCCGAATTAGTTGCCGCACATAGTGCAGTTGTTCCTCTTGTTAGTCTACTGTCTGGTAGAAACTATGTACTTCACGAGGCTATTTCCAGAGCTCTGGTCAAGTTAGGAAAAGACAGACCTGCTTGTAAAATGGAAATGGTAAAAGCTCGAGTCATCGAAAGCATACTGAACATCTTACACGAAGCACCTGATTATTTGTGCGCAGCTTTTGCAGAACTGTTGCGTATATTAACCAATAACGCCACCATAGCTAAAGGACCATCGGCTGCTAAAGTTGTTGAACCCTTGTTTTTGTTGTTGACAAGACACGATTTTGCGCCTGATGGACAACACAGTGCATTGCAGGTTTTGGTTAATATCTTAGAACATCCACAGTGCCGTGCTGACCATTCAATGACTTCTCGGAAAGTTATCGAACCGCTTATCCCTTTGCTTGATTCTCCTATATCAGTAGTGCAACAGTTGGCTGCCGAGCTTCTTTCACATCTGCTCCTCGAAGAACACCTTCAGAAGGATCCAGTGACACAGCAAGTAATTGGCCCTCTTATAAGAATTCTCGGTTCCGGTATACCTATAGTGCAGCAGAGAGCTGTAAAGGCCCTAGTTAGTATTGCACTAACATGGCCAAATGAAATCGCCAAAGAGGGCGGTGTTGTTGAGATTTCCAAAGTGATATTGCAAGCCGATCCTTCCCTTCCACACACTTTATGGGAGTCTGCTGCCTCGGTTCTGTCAAGTATTCTGCAATTCAGCTCAGAATTCTACTTGGAAGTGCCTGTTGCTGTTTTGGTAAGGTTGCTTCGATCTGGCTCAGAGAGCACGGTTGTTGGTGCGTTAAATGCTCTTCTGGTTTTGGAAAGTGATGATGGAACTAGCGCAGAAGCTATGGCTGATAGTGGCGCCATAGAGGCTCTCTTGGAGCTCCTAAGATCTCATCAGTGTGAGGAAATTGCTGCAAGACTCTTAGAAGTATTGCTGAACAATGTAAAGATCAGAGAAACGAAAGTTACTAAATCGGCCATCTTACCGTTATCTCAGTATCTCTTGGACCCACAAACACAAGCACAACACGCAAGACTATTGGCAACTTTGGCTCTCGGGGATCTGTTCCAGAACGAGGCTCTTGCTCGAACAGGCGATGCAGTTTCTGCTTGTCGTGCTTTAGTGAACGTGCTTGAAGACCAACCAACAGAAGAGATGAAAGTTGTAGCAATATGTGCTTTGCAAAATCTCGTGATGTACAGTCGATCAAATAGAAGAGCGGCTGCAGAGGCTGGGGGGGTTCGAGCGGTTGCAGAGGCTGGTGGTGTTCAGGTTGTATTGGatctgataggttcaagtaatcctgaaacttctgttcaggctgcaatgtttaTCAAACTTCTGTTCTCAAATAATACTATTCAAGAGTATGCTTCTAGCGAAACTGTCAGAGCAATCACTGCCACTATTGAAAAAGATTTATGGGCGTCCGGAACCGTGAACGAAGAATATCTGAAAGCATTAAATTCTCTATTTAGCAACTTCCCACGACTGAGAGCAACCGAACCGGCAACACTTAGCATTCCCCACCTGGTCACATCCTTAAAGACAGGTTCAGAGGCTTGTCAGGAAGCTGCCTTAGATTCACTTTTTCTGCTCAGACAAGCTTGGTCAGCTTGCCCTGCTGAAGTTTCAAGAGCTCAGTCGATTGCAGCTGCAGACGCTATTCCTTTCCTGCAGTACTTAATCCAGTCTGGCCCGCCTCGGTTTCAAGAGAAAGCAGAGTTTTTATTGCAGTGTTTGCCGGGGACGTTGGTGGTGATCATCAAGCGCGGTAACAATATGAAACAGTCTGTTGGAAACCCGAGTGTTTACTGCAAGATTACACTTGGCAACAATCCGCCGAGGCTAACCAAGGTGGTCTCTACTGGTCCTAATCCTGAGTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGTCCTCCAAAAGGCCAAAAGCTTCATATTTCGTGCAAAAACAAAAGCAAAGTGGGAAAGAGTAAATTTGGAAAAGTAACAATCCAAATCGATCGAGTGGTAATGCTCGGAGCCGTAGCCGGTGAGTACACTCTGTTGCCTGCAAGTAAAAGTGGACCACCAAGGAATCTAGAAATAGAATTTCAGTGGTCTAACAAAGCAGCTGATCCAACAAGTGAAACAGTTTAG 6471 0.4333 MHLHFQSFKVEAVNSVSSVSHAATDLERNGDGKAQDSEPPTPHSTLKMGLRDRNSSMEDPDGTLASVAQCIEQLRQSSSSVHEKEYSLRQLLDLIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSTEGQIAAAKTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEQLNTGLKTGNTVESLLTGTLKNLSSNAEGFWNSTIQAGGVDILLKLLAMGQPSTLANVCFLLASVMMEDASVCSKVLSAEVTKQLLKLLGPGNDDLVRAESAAGSNGIPALINATIAPSKEFMQGECAQALQENAMCALANISGGLSYVISSLGQSLESCSSPTQIADTLGAIASALMIYDNKAESTKPSDPLVVEQTLLKQFKPRLPFLVQERTIEALASLYGNPILSSKLANSDAKHLLVGLITMAANEVQDELIKALLTLCKSEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAKEDSARILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTINHLIHKSDTTTISQLTALLTSDLPDSKIYVLDALRNMLSVAPLSDILREGSAAGDAFDTMIMLLSSPKEETQAKSASALAGIFEARKDVRESSVAVKTLSSAMKLLNVESESILMESSNCLAAIFLSIKENRDVAAVARDALSPLVALANSSVLEVAETAVGAIANLILDSEIAKRVVAEEVILPATRVLQEGTISGKTHAAAAIARLLHSHKVDKAVTDCVNRAGTVLALVSFLDSSVDGSVATSEALEALAILSRSEETGANIKPACAILAEFPESISPIVLCIVNSTPTLQDTTIEILSRLCKDQPVVLGDTVASASGCISSIAKRIISSTNVRVKIGGAALLICTAKVNHQRLVEDLNISNLSANLIQSLVDILISSQPSSGNQSDDDNESISICRHTKEEVDSCESKTGTSIICGVDLAIWLLSILACHDGKNKTALMEAGAIDVLADRISNCYSQYSQIDYKEDYSMWICALLLAILFQDRDIIRAHATIKSVPALANLLKSEESANKYFAAQSIASLVCNGSRGTILSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVRYPDQVALEKLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLGRDCPSNKTVMVESGALEALTKYLSLGPQDATEEAATDLLGILFSSADIRKHDSAFGAVTQLVAVLRLGGRGARYSAAKALESLFSADHIRNAEISRQAVQPLVEILSTGSEREQHAAIAALVGLLSENPSRALAVADVEMNAVDVLCRILSSNCSMDLKADAAELCCALFGNTRIRSTMAAERCVEPLVSLLATEFSSAHHSVVRALDRLVDDEQLAELVAAHSAVVPLVSLLSGRNYVLHEAISRALVKLGKDRPACKMEMVKARVIESILNILHEAPDYLCAAFAELLRILTNNATIAKGPSAAKVVEPLFLLLTRHDFAPDGQHSALQVLVNILEHPQCRADHSMTSRKVIEPLIPLLDSPISVVQQLAAELLSHLLLEEHLQKDPVTQQVIGPLIRILGSGIPIVQQRAVKALVSIALTWPNEIAKEGGVVEISKVILQADPSLPHTLWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSESTVVGALNALLVLESDDGTSAEAMADSGAIEALLELLRSHQCEEIAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQHARLLATLALGDLFQNEALARTGDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNRRAAAEAGGVRAVAEAGGVQVVLDLIGSSNPETSVQAAMFIKLLFSNNTIQEYASSETVRAITATIEKDLWASGTVNEEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEACQEAALDSLFLLRQAWSACPAEVSRAQSIAAADAIPFLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKITLGNNPPRLTKVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGAVAGEYTLLPASKSGPPRNLEIEFQWSNKAADPTSETV 2156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00772 2156 Gene3D C2 domain 2025 2153 IPR035892 -
Car06g00772 2156 MobiDBLite consensus disorder prediction 25 61 - -
Car06g00772 2156 Gene3D - 1859 2024 IPR011989 -
Car06g00772 2156 Gene3D - 393 806 IPR011989 -
Car06g00772 2156 Gene3D - 53 392 IPR011989 -
Car06g00772 2156 Gene3D - 807 1156 IPR011989 -
Car06g00772 2156 SUPERFAMILY ARM repeat 648 1050 IPR016024 -
Car06g00772 2156 CDD C2 2028 2118 - -
Car06g00772 2156 Pfam C2 domain 2026 2117 IPR000008 -
Car06g00772 2156 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1183 1227 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 554 594 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 1216 1257 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 804 846 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 1556 1594 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 1717 1756 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 1385 1425 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 98 139 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 297 347 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 1171 1214 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 1426 1466 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 720 758 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 512 552 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 1596 1635 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 1299 1339 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 1468 1508 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 140 180 IPR000225 GO:0005515
Car06g00772 2156 SMART arm_5 1852 1893 IPR000225 GO:0005515
Car06g00772 2156 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 23 2147 - -
Car06g00772 2156 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2026 2137 IPR035892 -
Car06g00772 2156 SMART C2_3c 2027 2123 IPR000008 -
Car06g00772 2156 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 729 771 IPR000225 GO:0005515
Car06g00772 2156 SUPERFAMILY ARM repeat 1169 1554 IPR016024 -
Car06g00772 2156 SUPERFAMILY ARM repeat 1012 1146 IPR016024 -
Car06g00772 2156 Pfam Armadillo/beta-catenin-like repeat 108 138 IPR000225 GO:0005515
Car06g00772 2156 Pfam Armadillo/beta-catenin-like repeat 512 551 IPR000225 GO:0005515
Car06g00772 2156 Gene3D - 1164 1386 IPR011989 -
Car06g00772 2156 Gene3D - 1387 1506 IPR011989 -
Car06g00772 2156 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 523 565 IPR000225 GO:0005515
Car06g00772 2156 SUPERFAMILY ARM repeat 413 719 IPR016024 -
Car06g00772 2156 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 23 2147 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Car06g00772 2156 ProSiteProfiles C2 domain profile. 2007 2124 IPR000008 -
Car06g00772 2156 Gene3D - 1517 1858 IPR011989 -
Car06g00772 2156 SUPERFAMILY ARM repeat 1567 2024 IPR016024 -
Car06g00772 2156 SUPERFAMILY ARM repeat 69 299 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00772 Car-Chr6 7656241 7666933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00772 475 607 U-box Gene Family AT2G23140 39.259 8.82e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00772 - - mtr:MTR_8g091470 3711.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00772 06 7656241 7666933 Car05g02135 05 66559969 66570503 PCT