Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00769 ATGACAATTCTCTCTGAGCTCTTATATCATCTTTATGTAAAAACAATAGTCCTATTTACATATTTTCTAATAGAATTTTATGTTTTCATTTACTACCTAAAGTCAAATAAACATCAAATTTCCACTACCCAATACCTCAATTTCATTGAAGAGAGGAACCCCACAATTCACTACACAAGAAGGTTGAAGAAACAACACATAGATTGTAGGGTATGTTTATCTGATTTTGAAGAAGGGGACATTGTGAGGAACTTGAATTGTGAACACACATTTCATAAGGATTGTTTGGACAAGTGGTTTTTGCAAGATCAATATTATTGTGCTACTTGTCCTCTTTGTAGGAACAATGTTTTGCCAGATGATGTTGCTTCAAAGTATTGTTTGCTTCAAAATCAGGAAAATGGAGTGTAG 411 0.3285 MTILSELLYHLYVKTIVLFTYFLIEFYVFIYYLKSNKHQISTTQYLNFIEERNPTIHYTRRLKKQHIDCRVCLSDFEEGDIVRNLNCEHTFHKDCLDKWFLQDQYYCATCPLCRNNVLPDDVASKYCLLQNQENGV 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00769 136 PANTHER - 1 132 - -
Car06g00769 136 SUPERFAMILY RING/U-box 49 120 - -
Car06g00769 136 SMART ring_2 69 113 IPR001841 -
Car06g00769 136 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 31 119 IPR013083 -
Car06g00769 136 ProSiteProfiles Zinc finger RING-type profile. 69 114 IPR001841 -
Car06g00769 136 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 132 - -
Car06g00769 136 Pfam Ring finger domain 68 114 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00769 Car-Chr6 7628729 7630718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00769 68 125 C3H Transcription Factor Family AT1G15100 51.724 1.03e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00769 K16282 - gmx:102661133 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00769 06 7628729 7630718 Car05g02140 05 66621293 66622191 PCT