Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00767 ATGTTTCGTCTTGCCATGATGGGAGCTGGCAATTGGAAGATATTGGATCGGAAAATGCTTTTTTACTTTTGGAAATGGAAACACAAGTTGCTTTTGTTGTGCGCTTTCTATGATCCACTTCTCTGGGCATGGATTCTTCATCCTCCCAATATGTTTCCACAAGTATTGGTGTATATGATCCTATCCACCAGTTTGCTATATGGGAAGAACATTTCAAGAATAATGTCAGAGGATGCTTGTTTTGGAATATTGGGAACATCTACCAAGTATGATCAAGAAGCTAACAAACTTACTGATAAGATGCAAAGACGTCTTGCGCAAAACCGAGAGGCTGCTCGAAAGAGTCGTTTGAAGAAAAAGGCTTATGTACAACAGTTAGAATCGTGTCGTTTAAAGCTGGTGCAGCTAGAGCAAGAGCTAGATCGCACAAGACAACAACAGGAGGGGTTGTATGTTGCTGGTGGATTGTGTTCAAATAATTTGGGTTTTGAAGGCTCTGTAAATTCAGAAATAACAACTTTTAAGATGGAGTATGGAAACTGGGTGGAAGAGCAAAACAGACAAATATTGGAGTTGAAAACTGCTTTAAGTGCTCATATCAGTGACATACAGCTTGAGCCGATTGTAAATGGCACCATGAATCACTATTTCAAACTCTTCTGCATGAAATCTGCTGCTGCACAAGTAGATGTTTTCTATGTTATCAACGGCATGTGGAATACAACAGCTGAAAGGTTTTTCCTGTGGATCGGAGGTTTTCGCCCCTCTGAACTTCTTAAGGTTCTGGTCCCTTTGATTGAACCATTGACAGAGGAACAAAGGTTTGATGCATCTAATCTTGAACAGTCGTGTCGGCAAGCAGAAGATGCCCTTTCACAAGGTATGGAAAAACTCCAGGGAATGCTTGCTGACACAGTAGTAGCAGGACAACTCATTGAAGGAATTTACATTCCACAGATGGCTGTTGCAATAGAGAGGCTGGAAGCTCTGGCTAGTTTTGTCAACCAGCAGATGTCTCGAATACTTACCATACGTCAAACTGCTCGTTGGCTGCTTGCTTTGGGTGAGTATTTTCAACGTCTAAGGGCTTTGAGCACACTTTGGACTAACCGTCCTCGTGAACCTGCTTAG 1131 0.42 MFRLAMMGAGNWKILDRKMLFYFWKWKHKLLLLCAFYDPLLWAWILHPPNMFPQVLVYMILSTSLLYGKNISRIMSEDACFGILGTSTKYDQEANKLTDKMQRRLAQNREAARKSRLKKKAYVQQLESCRLKLVQLEQELDRTRQQQEGLYVAGGLCSNNLGFEGSVNSEITTFKMEYGNWVEEQNRQILELKTALSAHISDIQLEPIVNGTMNHYFKLFCMKSAAAQVDVFYVINGMWNTTAERFFLWIGGFRPSELLKVLVPLIEPLTEEQRFDASNLEQSCRQAEDALSQGMEKLQGMLADTVVAGQLIEGIYIPQMAVAIERLEALASFVNQQMSRILTIRQTARWLLALGEYFQRLRALSTLWTNRPREPA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00767 376 Pfam bZIP transcription factor 99 137 IPR004827 GO:0003700|GO:0006355
Car06g00767 376 PANTHER TRANSCRIPTION FACTOR TGA9 69 375 - -
Car06g00767 376 SUPERFAMILY Leucine zipper domain 100 145 IPR046347 GO:0003700|GO:0006355
Car06g00767 376 Coils Coil 119 153 - -
Car06g00767 376 Coils Coil 277 297 - -
Car06g00767 376 Pfam Seed dormancy control 189 263 IPR025422 GO:0006351|GO:0043565
Car06g00767 376 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 103 118 IPR004827 GO:0003700|GO:0006355
Car06g00767 376 Gene3D - 99 152 - -
Car06g00767 376 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 98 140 IPR004827 GO:0003700|GO:0006355
Car06g00767 376 ProSiteProfiles DOG1 domain profile. 171 371 IPR025422 GO:0006351|GO:0043565
Car06g00767 376 SMART brlzneu 96 159 IPR004827 GO:0003700|GO:0006355
Car06g00767 376 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 69 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00767 Car-Chr6 7597051 7600415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00767 75 376 Calmodulin-binding Proteins AT5G10030 65.287 1.55e-142 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car06g00767 DOG1 1.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00767 K14431 - gmx:100780003 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00767 06 7597051 7600415 Car05g02143 05 66641543 66644669 PCT