Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00761 ATGACAGGTAATAAGAGAATTAACCAAACAAGTCCAGTAGGAAGTCCAACATCAGGAAACATCTCAGACAGTTCATCCTCAAAAGAACAAGACAGGTTTCTACCAATTGCTAACGTGAGCCGCATAATGAAAAGAGCACTTCCTGCAAATGCAAAAATCTCTAAAGAAGCGAAAGAAACGGTTCAAGAATGTGTGTCTGAGTTCATAAGCTTCATAACAGGTGAAGCTTCTGATAAGTGTCAGAGAGAAAAGAGGAAGACGATTAACGGTGATGATCTTCTTTGGGCTATGACAACACTTGGGTTTGAAAATTATGTTGGTCCTTTGAAAGTTTATCTTAATAATTATAGGGAAATTGAGGGAGAAAAGAGTAATTCTATGGTTAAACAAGATGATTCTTCAATTGAAGTTGTTAATGATGGTGTTATTGGTGGGTTTTATTCTCAACAAGTGAATACTAATGGTTCTTCAAAGAGGTTTCATGAGATTGGAGGTGGTGGTGATGTTGAAACAGAACATGGAAGTGGTAATAGAATCATCCCACCAAATCTATGTTATAGGGTTGAATGGTAG 573 0.37 MTGNKRINQTSPVGSPTSGNISDSSSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNNYREIEGEKSNSMVKQDDSSIEVVNDGVIGGFYSQQVNTNGSSKRFHEIGGGGDVETEHGSGNRIIPPNLCYRVEW 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00761 190 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 14 135 IPR027113 GO:0001228|GO:0006355|GO:0016602
Car06g00761 190 MobiDBLite consensus disorder prediction 1 30 - -
Car06g00761 190 SUPERFAMILY Histone-fold 30 136 IPR009072 GO:0046982
Car06g00761 190 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 33 97 IPR003958 -
Car06g00761 190 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 14 135 - -
Car06g00761 190 ProSitePatterns NF-YB/HAP3 subunit signature. 64 80 IPR003956 GO:0005634|GO:0006355|GO:0043565
Car06g00761 190 PRINTS CCAAT-binding transcription factor subunit A signature 61 79 - -
Car06g00761 190 PRINTS CCAAT-binding transcription factor subunit A signature 80 98 - -
Car06g00761 190 PRINTS CCAAT-binding transcription factor subunit A signature 99 117 - -
Car06g00761 190 Gene3D Histone, subunit A 20 140 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00761 Car-Chr6 7559643 7560583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00761 25 132 CCAAT-HAP3 Transcription Factor Family AT4G14540 84.259 2.55e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Car06g00761 CBFD_NFYB_HMF 9e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00761 K08065 - gmx:100810059 257.684